Panicum virgatum (switchgrass): 120707575
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Entry
120707575 CDS
T07260
Name
(RefSeq) callose synthase 12-like
KO
K11000
callose synthase [EC:2.4.1.-]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pvir01003
]
120707575
Glycosyltransferases [BR:
pvir01003
]
Polysaccharide
Structural polysaccharide
120707575
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glucan_synthase
FKS1_dom1
Lumazine_bd_2
Motif
Other DBs
NCBI-GeneID:
120707575
NCBI-ProteinID:
XP_039848427
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Position
5K:complement(43411098..43417857)
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AA seq
1779 aa
AA seq
DB search
MTTPRAAQRRAAAPPAAAGGEPYNILPIHDLLADHPSLRFPEVRAAAAALRAVGGLRPPP
FAQWRADHDIMDWLGAFFGFQRDNVRNQREHLVLLLANAQMRLSSADFSDALDPRIAHQI
RKKLLRNYTSWCGFLGRRPNVHVPDGDPRADLLFTGLHLLVWGEAANLRFVPECLCYIYH
HMALELHRILEGYTDVATGRPANPAVHGENAFLTRVVTPIYNVIRAEVQASRGGTAPHAA
WRNYDDINEYFWRRDVFDRLGWPMEQSRQFFRTPPDRSRVRKTGFVEVRSFWNIYRSFDR
LWVMLVLYLQAAAIVAWEGATWPWDDLLSSRGSKSKDTQVRVLTIFITWAALRFLQSLLD
IGTQFRRAFRDGRMLAVRMVLKAIAAAAWVLAFSVLYKGIWDQRRSNGQWSSAVNSRIMR
LLYAAAVFVIPEVLALVLFIVPWVRNALEKTNWRICYALTWWFHSRSFVGRGLREGTIDN
VKYSIFWVLLLAVKFAFSYFLQIRPLVKPTKEIYKLSGIQYTWHEFFGQSNRFAVFVLWL
PVVLIYLMDIQIWYAIFSSLTGAFVGLFAHLGEIRDMKQLRLRFQFFASAMSFNIMPEEQ
QVNESFLPSRLRNFWQRLQLRYGFSRSFRKIESNQVEARRFALVWNEIISKFREEDIVSD
REVELLELPPELWNVRVIRWPCFLLCNELSLALGQAKEVKGSDRRLWRKICKNDYRRCAV
IEVYDSAKHLLLQILKDGTEEHGIVTQLFNDFDGSMQMGKFTVEYKMTELHSVHTRLVTL
LSLLLKPTKDVTKIVNALQTLYDVVIRDFQAEKRSMEQLRNEGLAQSRPTSLPFVDAVVL
PGEENFTFYKQVKRMHTILTSRDSMINVPKNLEARRRIAFFSNSLFMNIPRATQVEKMMA
FSVLTPYYNEEVLYSKDQLYKENEDGISILYYLQKIYPDEWEYFLERMKRDGMSDIKELY
SEKERLRSLRHWVSYRGQTLSRTVRGMMYYYEALKMLTFLDSASEHDLKTGSRELATMGS
SRIGSSRHDGVAGGSGYYSRAPSSRALSRASSSVSSLFKGSEYGTVLMKYTYVVACQIYG
QQKAKNDPCAFEILELMKKYEAMRVAYVDERQNNGGETEYFSVLVKYDQQLQREVEIYRV
KLPGELKLGEGKPENQNHALIFTRGDAVQTIDMNQDNYFEEALKMRNLLEEFNRHYGIRK
PKILGVREHVFTGSVSSLAWFMSAQETSFVTLGQRVLADPLKVRMHYGHPDVFDRLWFLG
RGGISKASKVINISEDIFAGFNCTLRGGNVTHHEYIQVGKGRDVGLNQVSLFEAKVASGN
GEQTLSRDVYRLGHRLDFFRMLSFFYTTVGFYFNTMMVVLTVYAFVWGRFYLALSGLEDY
ISKNTSSTNNAALGAVLNQQFVIQLGLFTALPMIIENSLEHGFLTAVWDFMKMQLQFASV
FYTFSMGTKTHYYGRTILHGGAKYRATGRGFVVEHKKFAENYRLYARSHFVKAIELGVIL
TLYASYGSASGNTLVYILLTLSSWFLVLSWILAPFIFNPSGLDWLKNFNDFEDFLNWIWF
HGGISVKVDQSWEKWWEDETDHLRMTGLWGSILEIILDLRFFFFQYAIVYRLHIADQSRS
ILVYLLSWACILLAFVALVTVAYFRDRYSAKKHIRYRLVQAIIVVGTVAAIVVLLEFTKF
QFVDTFTSLLAFLPTGWGIISIALVFKPYLRKSEVVWKTVVTVARLYDILFGVIVMAPVA
LLSWLPGLQEMQTRILFNEAFSRGLHISQIITGKKARAF
NT seq
5340 nt
NT seq
+upstream
nt +downstream
nt
atgaccacgccgcgcgccgcccagcgccgcgcggccgccccgccggcggccgcgggcggc
gaaccgtacaacatcctgcccatccacgacctcctcgccgaccacccgtcgctgcggttc
cccgaggtgcgggctgccgcggcggcgctgcgggcggtggggggcctccgcccgccgccg
ttcgcgcagtggcgcgccgaccacgacatcatggactggctcggcgccttcttcggcttc
cagcgggacaacgtcaggaaccagcgggagcacctcgtgctcctcctcgccaacgcgcag
atgcgcctctcctccgccgacttctccgacgcgctcgacccccgcatcgcgcaccaaatc
cggaagaagctgctccgcaactacacctcctggtgcggcttcctcggccgccgccccaac
gtccacgtccccgacggcgacccgcgcgccgatctgctcttcaccggcctgcacctcctc
gtctggggcgaggccgccaacctccgcttcgtgcccgagtgcctctgctacatctaccac
cacatggcgctcgagctgcaccgtatcctcgagggctacaccgacgtcgccacaggccgc
cccgccaaccccgccgtgcacggcgagaacgccttcctcacgcgcgtcgtcacgcccatc
tacaacgtcatccgcgcggaggtccaggccagccgcggtggcaccgcgccgcacgccgct
tggaggaactacgacgacatcaacgagtacttctggcgccgtgacgtgttcgaccgcctc
ggctggcccatggagcagtcgcgccagttcttccgcaccccacccgaccgcagccgtgtg
cgcaagacgggcttcgtcgaggtccgctcgttctggaacatttaccggagctttgacagg
ctgtgggtgatgctggtgctctatctgcaagccgcggccatcgtggcttgggagggcgcg
acgtggccgtgggatgatctactctcgtcccggggctccaagtccaaggacacacaggtg
cgcgtgctcaccattttcattacctgggccgcgctccgcttcctccagtccctgctggac
ataggcacgcagttccgccgtgccttcagagacggtcgcatgcttgctgtgcgcatggtg
ctcaaggccattgccgccgccgcatgggtccttgcgttttctgtcctatacaaggggatc
tgggaccagaggagaagcaatggacagtggtcgtcagcagttaattcgcggatcatgagg
ctcctttatgcagccgctgtgtttgttatccctgaagtccttgcccttgtgctcttcatt
gtgccttgggtgcggaacgcattggagaagacaaactggagaatctgttatgctctcacc
tggtggttccatagccgcagctttgttggccgaggattacgcgagggcaccattgacaat
gtcaagtactccatcttttgggtgcttttgcttgctgtgaagtttgccttcagctatttt
ctccaaattaggccacttgtaaaacccacaaaggagatatacaagctgagtggaatccag
tacacttggcatgagttctttggccaaagcaatcgatttgcagtgtttgtgctctggtta
ccagtggtgttgatatacctcatggatatccagatttggtatgcaatcttttcttctctg
actggtgcatttgtggggctttttgcacacttgggggagatcagggacatgaaacagctg
cggcttcggttccagttctttgcaagtgccatgtcattcaatatcatgccagaggagcag
caggtgaatgagagcttcttgcccagccggcttcgtaatttctggcagcggttacagcta
aggtatggtttcagccgatcattccggaagattgagtcaaatcaggtggaggcacggcgg
tttgcactcgtttggaatgagataatcagcaagttccgggaggaggacattgttagtgat
cgtgaggttgagcttcttgagctgccccctgagttgtggaatgtgcgtgtaatccgctgg
ccttgcttcttgctctgtaatgagctgtctcttgcacttggtcaggcaaaggaggtcaaa
ggatctgatcgcaggctatggaggaagatctgcaagaatgattatcgtcgttgtgcagtg
atcgaggtctatgatagtgcaaaacacttgctgcttcagatcctcaaggatggtaccgag
gaacatggtattgtcacacaattgttcaatgattttgatggatccatgcaaatggggaag
tttactgtggagtataagatgactgagctgcatagtgtccatacaaggcttgtaactcta
ttgagcctacttctcaagcccaccaaagatgttaccaagatagtcaatgccttgcagact
ctctatgatgttgtcattcgtgatttccaggctgagaagaggagcatggaacaactgaga
aatgaaggtcttgcacagtcaaggcccaccagccttccctttgtggatgcggttgtgctg
cctggagaggagaacttcaccttctataaacaagtgaagcgcatgcacaccatcctgacc
tccagggactctatgatcaatgtaccaaagaaccttgaagctcgtcgaaggatagccttt
ttcagcaattcattgtttatgaacatacccagggcaacccaagtggagaagatgatggct
ttcagtgtcttgactccttattataatgaggaggtgttgtacagcaaggaccagctctac
aaggagaatgaagatggcatctcaatcttatactatctacaaaagatttacccagatgaa
tgggagtacttcttagagagaatgaagcgtgatggaatgtctgatattaaggagctgtac
agcgagaaggaaaggctgagatctcttcggcactgggtctcttacagagggcagacatta
tcacgtacagtgaggggcatgatgtactactatgaagctctcaaaatgctgacctttctg
gattctgcctctgaacatgacttaaagactgggtcaagggagctagctactatgggttct
tcaagaattggatcctcgaggcatgatggggttgctggtgggtcagggtattacagcagg
gcaccttcctcacgtgcattgagcagagcaagcagtagtgtgagctccttgtttaaagga
agtgagtatgggactgtcctcatgaaatacacgtatgtagttgcatgccagatatatggt
cagcagaaagctaagaatgacccctgtgcttttgaaatattggagctaatgaaaaaatat
gaagcaatgcgtgttgcctatgttgatgaaaggcagaacaatggtggtgaaacagagtac
ttctccgttcttgtgaaatacgatcagcaactgcagcgggaggttgaaatttaccgggtt
aagttgcctggagagttaaagcttggtgaaggaaagccagaaaatcagaatcatgcactc
atcttcacaaggggtgatgcggtacaaacaattgatatgaatcaagataattactttgaa
gaagctctaaagatgagaaacctcctagaagagttcaatcgtcattatggaattcgcaag
cccaaaattcttggggttcgggaacatgtgttcacaggttctgtttcttctcttgcttgg
ttcatgtctgcccaggaaacaagttttgtcactctagggcagcgtgttctggctgatcca
cttaaagtcagaatgcattatggtcacccagatgtttttgatcgtctttggttcttgggc
cgaggtggtatcagtaaagcatcaaaagtaatcaacattagcgaggatatattcgctggt
ttcaactgtaccctccgtggtggcaatgttacacaccatgagtatattcaggtcggtaaa
ggtagagatgtgggactcaaccaggtctctctgtttgaagccaaagttgctagtggcaat
ggtgagcaaactttgagccgagatgtttacaggctgggccaccgattggatttcttccgg
atgctctctttcttctatacaactgttggattttatttcaacacaatgatggttgtgcta
actgtctatgcatttgtatggggccgcttttaccttgcgctcagtggtctcgaggactac
atcagcaagaacacttcctctactaataatgctgccctgggagctgtcctcaatcagcag
ttcgttatacagctaggtctgttcacagctttacccatgattattgaaaactcacttgag
cacgggtttctcactgctgtatgggatttcatgaaaatgcaactacagttcgcatctgtt
ttctacaccttctccatgggaactaagacacactattatgggaggacaatccttcatgga
ggtgcaaagtatcgggctactggccgaggttttgttgtggagcataagaagtttgctgag
aactataggctctatgctcgcagccattttgtcaaagcaatagagcttggtgtgatattg
actctttatgcatcttatggcagtgcctctgggaatactctggtgtatattttgctgaca
ctttcaagttggtttcttgtgttgtcatggattcttgctcccttcatttttaatccttct
ggtttagactggctgaagaattttaatgactttgaggattttctaaactggatttggttc
catggtgggatctcagtcaaggtagatcaaagctgggagaagtggtgggaggatgaaact
gatcatctccggatgactggtctatggggcagcatcttggaaatcatattagaccttcga
tttttcttctttcaatatgcaattgtttatcggcttcacattgctgatcagagtagaagc
atccttgtctatcttctttcatgggcatgcattctcctagcttttgtggctcttgtgaca
gtggcttactttcgagacagatattcagcaaaaaagcacatacgctatcgtcttgtccag
gcaatcattgttgttggcacagtggctgctattgttgtgctgttggagtttacaaagttt
cagtttgttgatacttttaccagtctcttggcttttctgccaactggctggggaatcata
tctattgctctggtattcaagccatatctgaggaagtccgaggtggtttggaaaactgtg
gtgactgtagcacgtttatacgatatattgtttggagtaattgttatggcacctgtggct
ttgttgtcatggttacctgggcttcaggaaatgcaaacaaggatcctgttcaatgaagcc
ttcagcaggggacttcatatttcccaaatcattaccggaaaaaaggcacgtgcgttttga
DBGET
integrated database retrieval system
