Panicum virgatum (switchgrass): 120707584
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Entry
120707584 CDS
T07260
Name
(RefSeq) transcription termination factor MTERF5, chloroplastic-like
KO
K15031
mitochondrial transcription termination factor family protein
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
pvir03012
]
120707584
03029 Mitochondrial biogenesis [BR:
pvir03029
]
120707584
Translation factors [BR:
pvir03012
]
Eukaryotic type
Release factors
120707584
Mitochondrial biogenesis [BR:
pvir03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Mitochondrial translation factors
120707584
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
mTERF
Motif
Other DBs
NCBI-GeneID:
120707584
NCBI-ProteinID:
XP_039848441
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Position
1K:40091618..40094555
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AA seq
483 aa
AA seq
DB search
MACLEAPPPLDLRTATGQPRGRKLQPWRLSLPRSSSCKACTLVSRQLPICNAQSYADELW
VAAPQSPASVRSRLLAAEREEAKAVLSLFLRQKGLRSTLAARIVNKSDGFIEHLVSKLQI
AYRSRYAEGRELSTPEIRDALLPYLEALSREHGDRLVEVVENFADPFSMERESSSMVLTP
TSSNKQKAVARISTPTSGGALPELVVYLLDLGMDHEEIKNIVRKFPAFAYYNVDRKIKPL
VELLLDLGVPRSSIPGIIRKRPQLCGISMSDNLKPMMAYLENIGVNRAQWSKVITRFPAF
LTYSRNKVETTVSFLTELGVSKKNIGKILTRCPHIMSYSVDDNLRPTAEYFRSIGADAAS
LIQKSPQAFGLNVEAKLKPITEFFLAREFSIEEIGIMVNRFGIIHTLSLEENLLPKYEFF
LTMEYPRSELVKFPQYFGYSLEQRIKPRYAQMTGSGVRLILNQMLSVSDARFEEILEKKR
TGV
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atggcctgcttggaagcgccccctcccctcgacctccgcacggccacgggccaaccccgc
ggccggaagctgcagccatggcggctcagcctgccgagatcctcctcatgcaaggcttgt
actctggtgtcccgacagcttccaatttgcaatgcacagtcatatgctgatgaactatgg
gtagctgctcctcagagccctgcatcggttcgctcaaggttacttgctgcagaaagagag
gaggcaaaagctgtattgtcattattcttgagacagaaaggtttgagaagtacgctagct
gcaaggatcgtcaacaaatcagatggttttattgagcacctggtgtcaaagctccagatt
gcttacagatctcgatatgctgaaggaagagagctgagcacacctgagatcagagatgct
ctccttccatatcttgaagctctttccagagaacatggtgatagattggttgaggtggtg
gagaatttcgctgatcctttttctatggaaagggaatcttcttcaatggtacttacaccc
acaagctcaaataaacagaaggcagttgctcgaataagcacaccaacctcagggggagcc
ctccctgagctagtggtttacctactagaccttggtatggatcatgaggagatcaagaat
attgtgcgcaagttcccagcatttgcatattacaatgtggatcgcaagataaaacccctg
gtggagctattgcttgaccttggtgtgccgaggtccagcataccaggaatcataaggaag
aggcctcaactctgtgggatcagcatgtcagacaatcttaaaccgatgatggcttatttg
gaaaacatcggtgtcaacagagctcagtggagcaaggtgattacccggttccctgcattt
ctcacgtatagcaggaacaaggtggagacaactgtgagcttccttactgagctaggggtt
tccaagaaaaacattggcaagatcctgacacgatgccctcatatcatgagctacagcgtc
gatgacaatctcaggccaactgctgagtacttccggtctattggtgcagatgctgcatct
cttattcagaagagtccacaggcttttggtctgaatgtcgaggcgaagctgaagccaatc
acagaattcttcctggcgagggagtttagcatagaggaaattggcattatggtgaacaga
tttggaattattcatacgttaagcttggaagaaaacttactcccgaaatacgagttcttc
ctgacgatggagtacccgaggagtgagctcgtgaaatttccacagtactttggatacagc
ttggagcaacggataaagccacggtatgctcagatgactggttctggggtgaggttgatt
ttgaaccagatgctgtcagtctctgatgccaggtttgaggaaattctagaaaagaagagg
accggagtttga
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