Panicum virgatum (switchgrass): 120707597
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Entry
120707597 CDS
T07260
Name
(RefSeq) auxin-responsive protein IAA5-like
KO
K14484
auxin-responsive protein IAA
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
120707597
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GFIT
Motif
Pfam:
AUX_IAA
Motif
Other DBs
NCBI-GeneID:
120707597
NCBI-ProteinID:
XP_039848460
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Position
5K:43705690..43709345
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AA seq
257 aa
AA seq
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MSPPLEPHDYIGLSAAAPPTPTSSSSSSSSPAPRLTLRLGLPGSDSPDREDVAAALSLGP
PPAAPGGSAKRAFPDPSLRTGAAKPGDVKQAPPAAPPAAKAQVVGWPPVRNYRKNTLAAS
APKSKAPAEDAASGGGPMYVKVSMDGAPYLRKVDIKMYSSYEDLSAALEKMFSCFITGQS
GLCKSSSKDRLTNGTKADAVQNQEYVLTYEDKDADWMLVGDLPWDLFTTICRKLKIMRGS
DAVGIAPRTIEQTGRNK
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgtcgccgcccctcgagccccacgactacatcggcctctccgccgccgcgccgccgacg
ccgacctcctcctcctcctcgtcctcctcgccggcgccgcgcctcacgctccgcctcggc
ctgccgggctccgactccccggaccgcgaggacgtcgccgccgcgctctccctcggcccg
ccgcccgccgcgcccggcggctccgccaagcgcgccttcccggacccctccctccgcacc
ggcgcggccaagcccggcgacgtcaagcaggcgccccccgccgcgccgccggccgccaag
gcgcaggtggtgggatggccgcccgtgcggaactaccggaagaacaccctcgccgccagc
gcccccaagagcaaggcgccggcggaggacgccgcgtccgggggcgggcccatgtacgtg
aaggtcagcatggatggcgcgccctacctcaggaaggtggacatcaagatgtattccagc
tacgaggacctctccgccgcgctcgagaagatgttcagctgcttcatcactggtcaaagt
ggtctatgtaagtcatcaagcaaagacaggcttacaaatggcacgaaggcggatgctgtt
caaaaccaggagtatgtccttacatatgaggataaggatgcggactggatgcttgttggt
gatcttccctgggatttgtttaccactatctgtcggaagttgaaaatcatgagggggtct
gatgctgttggaatagccccaagaaccattgagcagacaggtcggaacaagtaa
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