KEGG   Panicum virgatum (switchgrass): 120707609
Entry
120707609         CDS       T07260                                 
Name
(RefSeq) transcription factor-like protein DPB
  KO
K04683  transcription factor Dp-1
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    120707609
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:pvir03000]
    120707609
   03036 Chromosome and associated proteins [BR:pvir03036]
    120707609
Transcription factors [BR:pvir03000]
 Eukaryotic type
  Helix-turn-helix
   Fork head/winged helix cell cycle-controlling factors, DP
    120707609
Chromosome and associated proteins [BR:pvir03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     120707609
SSDB
Motif
Pfam: DP E2F_TDP DUF7795 ATP-synt_ab_C eIF-4B
Other DBs
NCBI-GeneID: 120707609
NCBI-ProteinID: XP_039848472
LinkDB
Position
5K:complement(43932998..43946142)
AA seq 241 aa
MAAPCGDADGAGLPPLPRRGGGGNAADREEEGDKSNKARKETAGAQRIARWGLRECSKIV
SKKVETKGRTTCNEVADEICAELKLTFNGQEFDDKNIRRRVYDVFSMLIALRVIAKDKKE
IKWTGLSNFRYEKMKKLEEAHKELTARIKNKKKLLQEIEKQFDDLQNIKFRNQVLQRPAE
SANGICLPFLLVKASKKARVEIEISEDSNFAGFDFNCAPFTLHDDVSILDGIRRNSIRRA
R
NT seq 726 nt   +upstreamnt  +downstreamnt
atggcggccccctgcggcgatgccgatggagccgggttacctccgcttcccagacgcggc
ggcggcggcaatgcggccgatagggaggaggagggcgataagagcaataaggcgaggaag
gagacggccggggcgcagcggatcgcccggtgggggctccgcgagtgcagcaagatagtt
tctaaaaaagttgagaccaaaggacggactacttgtaatgaggttgcagatgaaatttgt
gcggagctaaagttgacgtttaatggtcaagagtttgatgataagaatattaggaggaga
gtgtatgatgtttttagcatgctaattgcactacgagttattgcaaaagacaaaaaggaa
ataaagtggacgggcctttctaatttcagatatgaaaagatgaagaaattggaggaggct
cacaaagaactcacagccaggattaagaacaagaagaaacttctccaggaaattgaaaaa
cagtttgatgacctccagaatatcaagtttcgcaaccaggtactacagagaccagcagag
agtgcgaatggtatctgccttccattcttattggtcaaggcatccaaaaaagcaagggta
gaaattgagatttcagaggactcaaatttcgcaggtttcgacttcaactgtgcaccattc
accttgcatgatgatgtctcaattcttgatgggatcaggcgcaatagcataagaagagct
cggtag

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