Panicum virgatum (switchgrass): 120707621
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Entry
120707621 CDS
T07260
Name
(RefSeq) transcription initiation factor TFIID subunit 11-like
KO
K03135
transcription initiation factor TFIID subunit 11
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
120707621
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pvir03021
]
120707621
Transcription machinery [BR:
pvir03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
120707621
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAFII28
RPN2_C
Motif
Other DBs
NCBI-GeneID:
120707621
NCBI-ProteinID:
XP_039848486
LinkDB
All DBs
Position
5K:44028037..44030483
Genome browser
AA seq
208 aa
AA seq
DB search
MKDPFEAAVEEQDSPPESPAPPEEEAGAAGPADDPDEYDGGGPRAPPPRQPAAPAALAAA
AAKAKGRVQREQQEDEDDEEDQMEVDLEKLPSSTGDPDKLAKMNAILSQFTEEQMNRYES
FRRSGFQKSNMKRLLASITGSQKISIPTSIVVSGIAKMFVGELIETARIVMTERKDSGPI
RPCHIREAYRRLKLEGKIPRRSVPRLFR
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaccccttcgaggcggccgtcgaggagcaggactcgccgccggagtcgccggcg
ccgccggaggaggaggccggcgcggcgggccccgcggacgaccccgacgagtacgatggc
ggcggcccgcgcgccccgccgccgcggcagccggcggccccggcggcgctcgccgcggcc
gcggccaaggccaagggccgggtccagagggagcagcaggaggacgaggacgatgaggag
gaccagatggaggtcgacctcgagaagctcccctccagcaccggcgaccccgacaagctc
gccaagatgaatgctatactgtcccaatttacggaagagcagatgaaccgttatgagtca
ttccgaagatcaggatttcagaaatcaaacatgaaaaggctattggcaagcatcactgga
agtcagaagatatctatccctacatcaattgtggtatcagggatagcaaagatgtttgtt
ggagagctaattgaaacagccaggatagtgatgactgagaggaaggattctggaccgatt
agaccttgccacatcagggaagcatacagaagactgaagcttgaagggaagataccacga
cgatctgttcctaggcttttccgttag
DBGET
integrated database retrieval system
