KEGG   Panicum virgatum (switchgrass): 120707625
Entry
120707625         CDS       T07260                                 
Name
(RefSeq) replication stress response regulator SDE2-like
  KO
K25059  replication stress response regulator SDE2
Organism
pvir  Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pvir03041]
    120707625
   03032 DNA replication proteins [BR:pvir03032]
    120707625
   03400 DNA repair and recombination proteins [BR:pvir03400]
    120707625
Spliceosome [BR:pvir03041]
 Complex C
  Other components
   Complex C specific factors
    120707625
DNA replication proteins [BR:pvir03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    120707625
DNA repair and recombination proteins [BR:pvir03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    120707625
SSDB
Motif
Pfam: SDE2_2C SDE2 Sde2_N_Ubi_yeast AAA_lid_BCS1
Other DBs
NCBI-GeneID: 120707625
NCBI-ProteinID: XP_039848490
LinkDB
Position
5K:44080727..44086182
AA seq 447 aa
MAEATQYQILVRLLDGRTHCLRFTTPSVSGAALLDAVATLSRVPAAALRLVAGRLDVSPS
SVLTSAADGQFPSASALLRLRGGKGGFGSLLRGAASKAGQNKTSNFDACRDINGRRLRHV
NAERRLEEWKAEAADRQLEKLAEDFIKKKAKEAGRRGGPSAAEVDKYLEKYRKDAEICVN
AVEESVRASLGKRKTAPKPPPGADSKKFKIWLGKNKVEDNESDSDSDMDDEDREGDEGTD
AKSIVLDDGNCSNGSSKSEDEKPDLGSVSGSHSEGESSGEKSQHIDSDENGKCVESSVEP
TVRSGAEGGDVESDGSVETDVADQPISVSSAVVPSEEVLKSDGVKADVDGTASAASNQNN
PEVTQVEESTDVSNSHSEPLDLAKYSSAAELETLGLEKLKVELQSRGLKCGGTLQERAAR
LFLLKTTPLDKLPKKLLAKPTAGTGRK
NT seq 1344 nt   +upstreamnt  +downstreamnt
atggcagaggccacccagtaccagatcctggtgcggctcctcgacggtcgcacccactgc
ctccgcttcaccacgcccagcgtctccggcgccgccctcctcgatgccgtcgcgaccctc
tcccgcgttccggccgccgcgctccgtctcgtcgccggccgcctcgacgtatcgccctcg
tccgtactcacctcagccgccgacggacagttcccctcggcgtccgcgctcctccgcctc
cggggaggcaagggcgggttcggctccctcctcagaggggccgcctccaaggccggccag
aacaaaaccagcaattttgacgcctgccgcgacatcaacggccgccgcctccgccacgtc
aacgccgagcgccgcctcgaggaatggaaggccgaggccgcggatcgccagctcgagaag
ctcgccgaggacttcatcaagaaaaaggccaaggaggcgggccgccgcggtgggccctca
gccgccgaggtggacaaatacctcgagaagtaccgcaaggatgctgagatctgcgtcaac
gcggttgaggaatccgtgcgtgcatctcttgggaagaggaagaccgcgcctaaaccaccc
cctggggcagactccaagaagtttaagatttggttgggaaagaataaggtagaagacaat
gaaagcgatagtgacagtgatatggatgatgaggatagagaaggtgatgagggcacagat
gccaaatccatagttcttgatgacgggaattgctcaaatggatccagcaaaagtgaggac
gagaagcctgatctgggttccgtttctgggtcacattcagaaggagagtcctcaggtgaa
aagtcccagcacattgattcagacgaaaatggaaaatgtgttgagtcaagtgtggaaccg
acagtgagatcaggggctgaaggtggtgatgttgaatctgatggtagtgtggagactgac
gtagcggatcagcccatttctgtgagcagtgctgtagttccttcagaagaagtgctgaaa
tcagatggagtcaaagcagatgtggatggcactgcttcagctgcttcaaatcaaaacaac
ccagaggtgactcaagtagaagaatctactgatgtcagcaattctcattcagaaccatta
gacctggcaaagtacagttcagctgcagaattggagacacttggcttggagaagctcaag
gtggagctgcaaagtcgtggactaaaatgcggtggaacattacaggagcgagctgcccga
cttttccttctgaagacaactccactggacaagctaccaaagaagctgctcgcaaagccc
actgctgggactgggaggaagtga

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