Panicum virgatum (switchgrass): 120707631
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Entry
120707631 CDS
T07260
Name
(RefSeq) serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' kappa isoform-like
KO
K11584
serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03015
mRNA surveillance pathway
pvir04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
120707631
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
120707631
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pvir01009
]
120707631
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvir03019
]
120707631
03036 Chromosome and associated proteins [BR:
pvir03036
]
120707631
Protein phosphatases and associated proteins [BR:
pvir01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
120707631
Messenger RNA biogenesis [BR:
pvir03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
120707631
Chromosome and associated proteins [BR:
pvir03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
120707631
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B56
Motif
Other DBs
NCBI-GeneID:
120707631
NCBI-ProteinID:
XP_039848504
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All DBs
Position
5K:complement(44155799..44159044)
Genome browser
AA seq
500 aa
AA seq
DB search
MWKQLLHKLPRKSSASGKGDHAAGSSPGRNAAGNGSGIQRTSSCPSAGPARPAPGVKRMS
SAVFPSSVVAGIELLVPFKDVPNGEKPNLFVSKVSLCCVVFDFSDPSKNSAEKDFKRQAL
VDLVNYVESASSRFTEPMVAACCRMFAINLFRVFPPNCRSSSSGGGEGEEEEPMFDPAWP
HLHLVYDLLLKFIGSSSLDAKVGKKYFDHTFIVRLLELFDSEDPRERDCLKTILHRIYGK
FMVHRPFIRKAVSNIFYHFVFETDRHNGIAELLEVFGSVISGFALPLKEEHKIFLWRVLI
PLHKPKTVGVYLQQLTYCVTQFVEKEPKLASSVILGLLRYWPITNSQKEVMFLSVIEEVL
EATNMVEFQKCMVPLFRRIAHCINSSHFQVAERALFMWNNDHIVSLVAQNRQAIMPIVTP
ALEENIQNHWNVSVLNLTANVKKMLSEMDEELFSTCLAMHKEDGEREASLEQKRRLAWER
LESVAAIQPVTGNTAVLVSR
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgtggaaacagctcctgcacaagctgcctaggaagtcctctgcctccgggaagggcgac
cacgccgcaggctctagtccggggcgcaatgctgccgggaacgggagcgggatacagcgc
acgagcagctgcccgagcgccgggcctgcccgtccggcgcccggcgtgaagcgcatgtcg
tccgcggtgttcccgtcgagcgtggtggctggcattgagctgctcgtgccgttcaaggat
gtcccgaacggggagaagccaaacctgtttgtcagcaaggtgagcctgtgctgcgttgtc
tttgatttctcggaccccagcaagaattcggcggagaaggatttcaaaaggcaggcattg
gtggatctcgtgaattatgttgaatctgctagctcccgcttcacggagccgatggttgct
gcctgctgcaggatgtttgctatcaacttgttcagggtgttccctcccaactgcaggtcc
agttcatctgggggtggtgagggtgaagaggaggagccaatgtttgaccctgcatggccc
catctgcatcttgtgtatgatctcctactgaaatttattggctcctcatctctggatgca
aaggtaggaaagaaatattttgaccacacattcatcgtaaggttgcttgagctcttcgat
tctgaggacccaagggaaagggactgcttgaaaacaatattgcatcggatctatggaaaa
ttcatggtgcaccgtcctttcatccgcaaagcagtgagcaatatattctaccattttgtg
tttgagactgatcgccataatggtattgcggaactgttggaggtttttggcagtgttatt
agtgggtttgcattgcctctgaaggaggaacacaaaatctttctttggagggtgctaatt
cctttacacaagccaaaaacagtaggtgtgtatctgcagcagctaacctactgtgtgacc
cagtttgtagagaaggagccaaagcttgcaagttcggtgatacttggcttgctcagatac
tggccaataacaaatagtcagaaagaggtaatgtttctgagtgtgattgaagaggtcctg
gaggcaaccaacatggtcgaattccagaaatgcatggttccgttgttccgacgaattgct
cactgcatcaatagttcccacttccaggttgcagagcgagcactcttcatgtggaacaat
gatcacatcgtcagcttggtcgcacaaaaccggcaagcgatcatgcccattgtcacccca
gcgttggaagagaatatccagaaccactggaatgtgtcagtcctaaacctgacagccaat
gtgaagaagatgctgtcagagatggacgaggagctcttctctacctgtcttgccatgcat
aaggaagacggagagagggaggcgtcgctggaacagaaacgaaggctggcctgggagcgg
ctagagtccgtggcggcgatccagccagtgactggcaacacagccgtcctggtgagccgc
tag
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