KEGG   Panicum virgatum (switchgrass): 120707656
Entry
120707656         CDS       T07260                                 
Name
(RefSeq) guanine nucleotide-binding protein subunit beta-like protein A
  KO
K14753  guanine nucleotide-binding protein subunit beta-2-like 1 protein
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir03010  Ribosome
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    120707656
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pvir03019]
    120707656
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pvir04147]
    120707656
Messenger RNA biogenesis [BR:pvir03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     120707656
Exosome [BR:pvir04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   120707656
  Exosomal proteins of colorectal cancer cells
   120707656
  Exosomal proteins of bladder cancer cells
   120707656
SSDB
Motif
Pfam: WD40 Beta-prop_IFT122_1st Beta-prop_WDR3_1st Beta-prop_WDR5 Beta-prop_THOC3 WD40_Prp19 WD40_Gbeta Beta-prop_WDR3_2nd WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_EML_2 WD40_MABP1-WDR62_2nd Beta-prop_SPT8 Beta-prop_WDR36-Utp21_1st NBCH_WD40 WDR55 Beta-prop_WDR75_1st WDR90_beta-prop_4th Beta-prop_WDR90_POC16_2nd Beta-prop_SCAP DSE1_N Beta-prop_EML ANAPC4_WD40 Beta-prop_TEP1_C WD40_MABP1-WDR62_1st TRM82_WD ASA1 Beta-prop_VPS8 Beta-prop_Aladin Beta-prop_WDR41 Beta-prop_EIPR1 Beta-prop_WDR75_2nd CFAP251_N Beta-prop_HPS5 Beta-prop_NOL10_N Beta-prop_DCAF12 Beta-prop_RIG_2nd Beta-prop_DCAF4 WD40_RFWD3 Beta-prop_WDR19_1st Beta-prop_NWD2_C PROPPIN Beta-prop_ACSF4 eIF2A Beta-prop_NUP159_NUP214 Tricorn_2nd Beta-prop_pof12
Other DBs
NCBI-GeneID: 120707656
NCBI-ProteinID: XP_039848547
LinkDB
Position
5K:44400800..44403218
AA seq 334 aa
MAGAQETLVLAGVMRGHNDVVTAIAAPIDNSPFIVSSSRDKSLLVWDLSNPVQAAGDGTT
TADYGVPFRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLSTGLTTRRFVGHDKDV
LSVAFSVDNRQIVSAARDRTIKLWNTLGECKYTIGGDHGAGEGHTGWVSCVRFSPNTHQP
TIVSGSWDRSVKVWNLTNCKLRCTLQGHGGYVNAVALSPDGSLCASGGKDHATLLWDLTE
GKRLYTLDAGSIIHSLCFSPNRYWLCAATQDSIKIWDLESKHIVQDLRPEVPAGKNQILY
CTSLSWSADGSTLYAGYTDGTIRIFKISGFGYSI
NT seq 1005 nt   +upstreamnt  +downstreamnt
atggccggcgcgcaggagaccctggtgctcgccggcgtgatgcgcggccacaacgacgtc
gtgacggcgatcgccgcgcccatcgacaactcccccttcatcgtctcgtcctcccgcgac
aagtcgttgctggtctgggacctctccaaccccgtccaggccgccggggacggcaccacc
accgccgactacggcgtgccgttccgccgcctcaccgggcactcccacttcgtccaagac
gtcgtcctcagctccgacggccagttcgcgctctcgggatcctgggacggggagctccgc
ctctgggacctctccacgggcctcaccacccgccgcttcgtcggccacgacaaggacgtc
ctctccgtcgccttctccgtcgacaaccgccagatcgtgtccgctgcccgcgaccgcacc
atcaagctgtggaacacgctcggcgagtgcaagtacaccattggtggcgaccacggcgcc
ggcgagggccacaccggctgggtctcgtgcgtccgcttctcgcccaacacacaccagcca
acgatcgtctccggctcctgggaccgcagcgtcaaggtctggaacctcaccaactgcaag
ctccgctgcactctccaaggtcacggcgggtacgtcaacgccgtcgctctgagtcctgat
ggttctctgtgcgcctccggagggaaagaccatgctaccttgctgtgggacttgactgag
ggcaagaggctgtacacgctggacgcgggctccatcatccactcgctctgcttctcgccc
aaccgctactggctctgcgcagccacacaggactccatcaagatctgggatcttgaatcg
aagcacattgtgcaggaccttaggcctgaggtccctgctggcaagaaccagattctgtac
tgcacaagcttgagctggagcgctgatggaagcaccctctacgctggttacactgatgga
accatccggatctttaagatctctggattcggctactcgatctaa

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