Panicum virgatum (switchgrass): 120707657
Help
Entry
120707657 CDS
T07260
Name
(RefSeq) acidic endochitinase-like
KO
K01183
chitinase [EC:
3.2.1.14
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00520
Amino sugar and nucleotide sugar metabolism
pvir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
120707657
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.14 chitinase
120707657
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_18
Motif
Other DBs
NCBI-GeneID:
120707657
NCBI-ProteinID:
XP_039848548
LinkDB
All DBs
Position
5K:complement(44409843..44411108)
Genome browser
AA seq
303 aa
AA seq
DB search
MASSRLCRPLVAASFLAAFAAVSSAGKVAVYWGQGGGEGTLADTCASGLYDFVNIAFVSA
FGNGGGQPPVLNLADHCDPAAGTCAVFSSDIRSCQARGVKVLISLGGATRTYSLTSAEEA
RGLADYLWDNFLGGASAASRPLGDAALDGVDFDIEQGGGDHYDELARALSSRCGGACLLT
AAPQCPYPDAHLGKAIGTGLFSHVWVQFYNNPMARCQYAPGGASDLEDAWARWTAAVPPP
ADVFLGLPAAEGATEKGGYIDADTLKSQVLPAVRGAANYGGLMLWDRARDAASGYSSSVR
GSV
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atggcttcttccagactctgtcggcctctcgtcgccgcgtccttcttggctgccttcgcc
gccgtgtccagcgccggcaaggtcgccgtttactggggccagggcggcggggagggaacc
ctcgcggacacgtgcgcctccgggctgtacgacttcgtgaacatcgccttcgtcagcgcg
ttcggcaacggcggcggccagcccccggtcctcaacctcgccgaccactgcgaccccgcc
gcgggcacctgcgccgtgttcagctccgacatccggtcgtgccaggcgagaggcgtcaag
gtgctcatctccctcggcggcgccacgcggacctactccctcacctccgccgaggaagcg
cgcgggctcgccgactacctgtgggacaacttcctcgggggcgcctcggcggcgtcccgc
ccgctcggcgacgcggcgctcgacggcgtcgacttcgacatcgagcagggcggcggcgac
cactacgacgagctggccagggccctgtcgtcccggtgcggcggcgcgtgcctgctcacg
gcggcgccgcagtgcccgtacccggacgcgcacctcggcaaggcgatcgggacggggctg
ttcagccacgtgtgggtgcagttctacaacaacccgatggccaggtgccagtacgcgccg
ggcggcgcgagcgacctggaggacgcgtgggcgcggtggacggccgccgtgccgccgccg
gcggacgtcttcctgggcctcccggcggcggagggcgcgacggaaaagggcgggtacatc
gacgcggacacgctgaagtcgcaggtgctgccggcggtgcgaggcgcggccaactacggc
ggcctcatgctgtgggaccgcgccagagacgccgcctcgggttacagcagcagcgtgcgc
gggagcgtgtga
DBGET
integrated database retrieval system
