KEGG   Panicum virgatum (switchgrass): 120707671
Entry
120707671         CDS       T07260                                 
Name
(RefSeq) 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin), chloroplastic-like
  KO
K03526  (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir00900  Terpenoid backbone biosynthesis
pvir01100  Metabolic pathways
pvir01110  Biosynthesis of secondary metabolites
Module
pvir_M00096  C5 isoprenoid biosynthesis, non-mevalonate pathway
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09100 Metabolism
  09109 Metabolism of terpenoids and polyketides
   00900 Terpenoid backbone biosynthesis
    120707671
Enzymes [BR:pvir01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.7  With an iron-sulfur protein as acceptor
    1.17.7.1  (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase (ferredoxin)
     120707671
    1.17.7.3  (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase (flavodoxin)
     120707671
SSDB
Motif
Pfam: GcpE Sgf11 DUF7575 Zn_ribbon_9
Other DBs
NCBI-GeneID: 120707671
NCBI-ProteinID: XP_039848567
LinkDB
Position
1K:complement(40160248..40166114)
AA seq 746 aa
MATGVAPAPLPHVRVRDGGIGFTRSVDFAKVLSVPGVSTMRTSSSRSRAFVVKNSSTGSE
TMELEPASEGSPLLVPRQKYCESTHQTRRRKTHTVMVGNVPLGSDHPIRIQTMATSDTKD
VAKTVEEVMRIADKGADLVRITVQGKKEADACFEIKNTLVQKNYNIPLVADIHFAPAVAL
RVAECFDKIRVNPGNFADRRAQFEQLEYTDNEYQKELEHIEKVFSPLVEKCKQYGRAMRI
GTNHGSLSDRIMSYYGDSPRGMVESALEFARICRKLDFHNFVFSMKASNPVVMVQAYRLL
VAEMYNLGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLMDGLGDTIRVSLTEPPEEEIDP
CRRLANLGTQATNLQIGVAPFEENHRHYFDFQRRSGQLPLQKEGEEVDYRNVLHRDGSVL
MSVSLDQLKAPELLYRSLAAKLVVGMPFKDLATVDSILLRELPPVEDAEARLALKRLVDI
SMGVLTPLSEQLTKPLPHAIALVNLEELSSGAHKLLPQGTRLAVTLRGDESYEQLDILKG
VDDITMLLHSVPYGEEKTGRVHAARRLFEYLQNNGLNFPVIHHIEFPKTIGRDDLVIGAG
ANVGALLVDGLGDGVLLEAADQEFEFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDL
QEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVQRGI
AMEGATDALIQLIKDHGRWVDPPAEE
NT seq 2241 nt   +upstreamnt  +downstreamnt
atggcaaccggcgtggcaccagctcctctcccacatgtccgggtgcgtgatggcggcatc
gggttcaccaggagcgtcgactttgctaaggtcttatcagttcctggtgtcagcactatg
aggaccagctcctcgaggagcagggcgttcgtggtgaagaactccagtactggttcagaa
accatggagctcgagccagcatctgaaggaagcccacttttagtccccaggcaaaagtac
tgtgaatctacacatcagacaaggagaaggaaaactcatactgtaatggtggggaatgtc
ccactcggtagtgatcatcccataaggattcagaccatggcgacctcagataccaaggat
gttgccaaaactgtagaagaggtgatgaggatagcagataaaggagccgatcttgttaga
ataaccgtacagggtaagaaggaagctgatgcctgctttgagatcaagaacaccctggtt
cagaagaattacaacattccactagtggccgatattcattttgcccctgcagtagcttta
agagtggcagaatgctttgacaaaattcgcgtgaaccccggaaattttgctgatcgacgt
gctcaatttgagcagcttgaatatacagacaacgagtaccaaaaagagctcgagcatatt
gagaaggtattttctccattagttgagaaatgcaagcagtatgggagagcaatgcgcata
ggtacaaatcatggaagcctctctgaccgcataatgagttactatggtgattctccacgg
ggaatggttgagtctgctttggaatttgctaggatatgtcggaagttggacttccacaac
tttgtgttttcaatgaaagctagtaaccctgttgtcatggtccaagcataccgcctgctt
gttgcagaaatgtataacctaggatgggattatccattgcacttgggtgttacagaagcc
ggagagggtgaagacggaaggatgaagtctgctattggcattggaacacttttaatggat
ggcctgggtgacacaatccgcgtctccctcacagaaccaccagaagaagagatcgatcct
tgccggagattggcaaatcttgggacacaggctacaaatcttcaaatcggggtggcacca
tttgaagagaatcacaggcactattttgacttccagcgtaggagtggtcaattacctttg
cagaaggagggcgaggaagttgactacagaaatgtactgcatcgtgatggctctgtactg
atgtcagtttcattggaccagttgaaggctcctgagctcctttataggtctcttgcagcg
aagcttgtggttggcatgcctttcaaggaccttgctactgtagattccattcttttgagg
gagctcccccctgtagaagatgctgaagctagacttgcactcaaaagattagttgacatc
agcatgggagtgttgacccccttgtcagagcagttgacaaagccactcccacatgcaatt
gcgcttgtcaaccttgaggaactgtcaagtggggctcacaaacttttgccacaaggtact
agacttgctgtcacccttcgtggagatgaatcatacgagcagctagatatccttaagggt
gttgatgatataacaatgctgctacatagtgttccatatggtgaggagaagactggcaga
gtacatgctgctaggaggttattcgagtacttacagaacaatggcttgaactttcctgta
atccatcacatagagttccctaaaaccattggcagagatgatcttgtcattggtgctggg
gcgaatgttggtgctctcctagtcgatggtcttggtgatggtgtacttcttgaagctgct
gaccaggaatttgagttcctgagggacacatctttcaacttgcttcagggttgcagaatg
cgcaacacaaaaactgaatatgtgtcttgtccttcgtgtgggcgaacactcttcgacctt
caggaaattagtgctgagattagagaaaagacctctcatctgccaggcgtctcgatcgcc
atcatgggttgcattgtcaacgggccaggagagatggccgatgccgattttggatatgtg
ggaggcgctcctggaaagattgatctgtatgttggcaagaccgttgtgcagcgcggcatc
gccatggaaggcgccaccgacgccctgatccagctgatcaaggaccacggccgatgggtg
gaccctcccgccgaggagtaa

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