Panicum virgatum (switchgrass): 120707687
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Entry
120707687 CDS
T07260
Name
(RefSeq) phytochrome-associated serine/threonine-protein phosphatase-like
KO
K15498
serine/threonine-protein phosphatase 6 catalytic subunit [EC:
3.1.3.16
]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pvir01009
]
120707687
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pvir03400
]
120707687
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
120707687
Protein phosphatases and associated proteins [BR:
pvir01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-6
Catalytic subunits
120707687
DNA repair and recombination proteins [BR:
pvir03400
]
Eukaryotic type
DSBR (double strand breaks repair)
Other DSBR factors
Protein phosphatase 6
120707687
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
STPPase_N
VOMI
Motif
Other DBs
NCBI-GeneID:
120707687
NCBI-ProteinID:
XP_039848590
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All DBs
Position
5K:44655052..44659470
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AA seq
303 aa
AA seq
DB search
MDLDLWISKVKEGQHLAEHELQSLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMK
LFATGGHVPETNYIFMGDFVDRGFNSLEVFTILLLLKARYPAHITLLRGNHESRQLTQVY
GFYDECQRKYGNANAWRYCTDVFDYLTLSAIINGQVLCVHGGLSPDIRTIDQIRTIDRNC
EIPHEGPFCDLMWSDPEEIETWAVSPRGAGWLFGSRVTAEFNFVNGIELVCRAHQLVQEG
LKYMFQEKGLVTVWSAPNYCYRCGNVASILSFDEKMERDVKFFTETEENNQMRGPRTAVP
YFL
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atggatttggatctgtggatctccaaggtcaaggagggccagcacctcgccgagcacgag
ctccagtccctctgcgaatacgtgaaggagatcctcatcgaagagtccaacgtgcagccg
gtgaacagccccgtgacggtgtgtggtgacatccacgggcagttccatgacctgatgaag
ctgtttgcgactggtggccacgttccggagaccaactatattttcatgggtgattttgtg
gaccgtggcttcaacagtctggaggttttcaccattctcttgctactaaaagcaaggtat
ccagctcacataacccttctgcgtggaaaccatgaaagtaggcagctgacacaggtgtat
ggtttctacgatgagtgccagaggaagtatggtaatgccaatgcatggcggtactgcact
gatgtttttgattaccttacactttcagcgatcattaatggccaagtcctctgtgttcat
ggcggtctttctcctgatatacgcacaattgatcagatacggacaattgatcgcaattgt
gaaattccccatgaaggtcctttctgcgatcttatgtggagtgaccctgaagagatagag
acatgggctgttagtccccgtggagcaggttggctgttcggatcacgagtcaccgcagag
ttcaactttgttaacggtatcgagctagtttgccgggctcaccagctggtgcaggaaggc
ttgaagtacatgtttcaggagaagggccttgtgactgtgtggtctgcacctaattattgc
tacagatgtggcaacgtagcttctatattaagcttcgatgagaagatggaaagagatgtc
aagttcttcacagagacggaggagaacaaccagatgcgaggcccaaggaccgcagttcca
tatttcctctga
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