Panicum virgatum (switchgrass): 120707763
Help
Entry
120707763 CDS
T07260
Name
(RefSeq) farnesyl pyrophosphate synthase-like
KO
K00787
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00900
Terpenoid backbone biosynthesis
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
Module
pvir_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
120707763
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
pvir01006
]
120707763
Enzymes [BR:
pvir01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
120707763
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
120707763
Prenyltransferases [BR:
pvir01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
120707763
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Pfc11_Rna14-15-ID
Motif
Other DBs
NCBI-GeneID:
120707763
NCBI-ProteinID:
XP_039848703
LinkDB
All DBs
Position
5K:45485756..45489959
Genome browser
AA seq
355 aa
AA seq
DB search
MATAGVAVANGSGGADTKAAFKEIYSKLKEEMLEDPAFEFTDESLQWIDRMVDYNVLGGK
CNRGLSVIDSYKILRGVDVLSKEETFLACTLGWCIEWLQAYFLVLDDIMDNSQTRRGQPC
WFRVPQVGLIAVNDGIILRNHISRILQRHFKGKPYYVDLIDLFNEVEFKTASGQLLDLIT
THEGEKDLSKYNLTVHRRIVQYKTAYYSFYLPVACALLLAGENLDNFGDVKNILVEMGTY
FQVQDDYLDCYGDPDFIGKIGTDIEDYKCSWLVVQALERTDEDQKKILFENYGKSDPACV
AKVKDLYKELNLEEVFHEYERESYTKLTADIEAQPNKAVQTVLKSFLHKIYKRDK
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atggcaacggcgggggtggcggtggccaacggctccggcggcgccgacacgaaggccgcg
ttcaaggagatatacagcaagctcaaggaggagatgctcgaggaccccgccttcgagttc
accgacgagtcgctccagtggatcgaccgcatggtggattacaatgtgctcggaggaaag
tgcaaccgcgggctctcagtcattgatagctacaagatattgaggggtgtcgatgttctg
agcaaggaggagacatttctggcctgcacccttggttggtgtattgaatggcttcaagct
tattttctggtgctggatgatatcatggacaactcccagacacgacgtgggcagccttgc
tggtttagggtgcctcaggttggcctcattgctgtaaatgacgggattatccttcgcaat
catatttcacggatccttcaacgccacttcaaaggaaagccctattatgttgatctcatt
gatttgttcaatgaggttgagttcaagactgcttcagggcagttgttggatcttatcact
actcatgagggtgaaaaggacctaagtaaatataacttgacggttcaccgacgcatcgtt
cagtacaagacagcctactattcattttatctccctgtcgcatgtgcactgctgctggct
ggtgagaacttggataactttggtgatgtaaagaacattcttgttgaaatgggaacatat
tttcaagtccaggatgattatctagattgttatggtgatcctgatttcattggcaagatc
ggaactgatattgaagactacaagtgttcttggttagttgtgcaagctcttgaacgtact
gatgaggaccaaaagaaaatcctatttgaaaattatgggaagtccgatccagcatgtgtt
gcaaaggtgaaagacttgtacaaagagcttaatctggaggaggttttccacgagtacgag
agggagagctacaccaagctgaccgccgacatcgaggcccagccgaacaaggcggttcag
accgttctgaagtccttcctgcacaagatctacaagagggacaagtag
DBGET
integrated database retrieval system
