Panicum virgatum (switchgrass): 120707770
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Entry
120707770 CDS
T07260
Name
(RefSeq) chloride channel protein CLC-e-like isoform X1
KO
K03281
chloride channel protein, CIC family
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvir02000
]
120707770
Transporters [BR:
pvir02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
120707770
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Voltage_CLC
CBS
Motif
Other DBs
NCBI-GeneID:
120707770
NCBI-ProteinID:
XP_039848710
LinkDB
All DBs
Position
5K:45561145..45566072
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AA seq
737 aa
AA seq
DB search
MAPSAATTTTTSSARLLLASPQSPPALLGLRGCGRRSTVGLARRGGGCARRLRVVRRGAA
DEEAGATTRGQQSVEEAVEDPAPGRDLVTLAACLVGLLTGVSVVLFNLSVHEIRDIFWDG
IPSRGASWLREEPISEVWQRVIFVPVSGGVIVGGLNALRISVKTNSDGPMSKAKSAIRPL
LKAVAASFTLGTGNSLGPEGPSVEIGSSIAKGFGNVFGWEGGKKLSLVAAGSAAGISSGF
NAAVAGCFFAVESVLWPSSTDSSSLANSTPMVILSSVIASVVSEIGLGSDPAFTVPEYDF
RSPTELPLYLLLGVFCGLVSITLSRCTSLAMETVERLQSATGLPKAASPALGGLIVGLLA
LMYPEVLYWGFENVDILLESRPFTSGLSATILVQLIGVKILATSLCRAFGLVGGYYAPSL
FIGAATGMAYGKFMRFTFTGPEPLLHIPFLDVASPQAYGLVGMAATLAGVCKVPLTSVLL
LFELTHDYRIVLPLLGAVGLSSWIASPQRFSKSIRSKLDSLEEKSSIAQQANSLPTQNKQ
VRSMDTVDSSQELCKIESSLCVYDANDENMFENITVAEAMKTNYFSVSMTTPLVEALDLM
LAEKQPFVIVTENNRSVIGLLALKSIQDFCRAAKDTRAQDELKEFLVSHVYHAGKCKSCY
VTPQMPLTTAEKIMDSHGVDHLPVVSEPANLQDSGLLIGFVDRECITIARRAMSMKEFFR
STYEIGKEERSSTEGRR
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atggcgccatccgctgccaccaccaccaccacctcctccgcgcgcctcctcctcgcctcg
ccccagtccccgcccgctctcctcgggctccgcggctgcggccgtcgcagcaccgtgggg
ctggcgcgccgaggcggcggctgcgcgcgccgcctgcgggttgttcggcgcggcgcggcg
gacgaggaggccggggccaccacgcgggggcagcagtcggtggaggaggcagtcgaggac
ccggcgcccggccgcgacctcgtcacgctcgcagcctgcctcgtcggcctcctcaccggc
gtctccgtcgtgctcttcaacctctcggttcatgaaatacgtgacattttctgggatggt
attccttcgcgtggcgcttcatggctgagggaagaaccgatcagtgaagtctggcagaga
gtgatatttgttccagtcagtggaggtgttatagtaggaggattgaacgcattaagaatt
tctgtcaaaactaactcagatggccctatgtccaaggcaaagagtgcaattaggccatta
ttgaaagctgtggcagcatctttcacacttggaactggcaattctttgggtcctgagggt
cccagtgtggagattggttcttcaatagccaaaggatttggaaatgtgtttggctgggag
ggtgggaaaaagctatctcttgtggcagctggatcagcagctggaatttcatcaggtttt
aatgctgctgttgctgggtgcttttttgcggtggaatctgttttgtggccttcttctacg
gattcctcatcccttgccaactcaacaccgatggtgatactcagttcagtgatagcatct
gttgtttcagaaattggtctaggttccgaccccgctttcactgttccagaatatgatttt
cgctccccaacagaacttcctctatatcttttgctgggtgtcttctgtggattggtatca
atcacattatcaagatgtacatcacttgctatggagacagttgagagattacaaagtgca
acaggattaccaaaggctgcatcgcctgcattaggtggccttattgttggtctcctagca
ctcatgtaccctgaagtattgtattggggctttgaaaatgttgatatcttgctggaatca
cgaccatttacaagtggcctctccgcgactatattggtccagctcattggagtgaaaata
ttagcaacgtctttgtgcagagcttttggattggttggtggttactatgcaccatctctt
tttattggtgcagccacagggatggcatatggcaagttcatgaggtttacattcactggt
cctgaaccactcctgcatatccctttcctagatgtggcatcacctcaagcttatggcctg
gtaggtatggcggctacccttgctggtgtatgtaaggtgcctctgacatcggtgctccta
ctttttgagcttacacatgactatcgtatagttctacctttgcttggggctgttgggtta
tcatcttggattgcttctcctcaaaggttctctaaaagcattaggagtaagctggattct
ctggaggagaaatcaagtattgctcaacaggcaaacagcttgcccactcaaaacaaacaa
gtcagatccatggatacggttgattcatctcaagaattatgtaaaattgaaagctccctt
tgtgtctatgatgccaatgatgagaatatgtttgagaatattactgttgcagaggccatg
aaaactaactatttttcagtctcaatgacaactccattagttgaggcactagatcttatg
cttgcagagaagcagccctttgttattgtcactgagaataaccggtctgtaataggcttg
ttagcactaaaaagtatccaagatttctgccgagctgcaaaagatacaagggcacaagat
gagctaaaggaattcctggtatctcatgtttaccatgcaggcaagtgtaaatcatgctat
gtgactcctcagatgccacttactactgcagagaagattatggattctcatggtgtggat
caccttcctgtagtctctgaacctgctaatcttcaggacagcggacttttgataggtttt
gtagacagagaatgcatcaccatcgctcgaagagccatgtcaatgaaagaatttttcaga
tctacatatgagattgggaaggaagagagatctagcacggaagggaggagatga
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