Panicum virgatum (switchgrass): 120707779
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Entry
120707779 CDS
T07260
Name
(RefSeq) chitinase 6-like
KO
K01183
chitinase [EC:
3.2.1.14
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00520
Amino sugar and nucleotide sugar metabolism
pvir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
120707779
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.14 chitinase
120707779
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GFIT
Motif
Pfam:
Glyco_hydro_19
Chitin_bind_1
Motif
Other DBs
NCBI-GeneID:
120707779
NCBI-ProteinID:
XP_039848726
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Position
1K:40265715..40266812
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AA seq
280 aa
AA seq
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MAAPPKQLSSTAAAPLAALLVLALAAAAGPPAAAQSCGCAPDLCCSRFGFCGTGRDYCGA
GCQSGPCAAPATNNVSVASVVTPAFFDALLAQAAPGCEAAGFYTRDAFLAAAGYYPAFGR
TGTVDDSKREIAAFFGNANHETIRFCYINEINGPSKNYCDPSNTQWPCQAGKGYYGRGPL
QISWNYNYGPAGQSIGFDGLGDPDAVARSAVVAFRAALWYWMNSVHEPLAAGGGFGATIR
AINGALECDGKNPSAVSSRVGYYKQFCQDFGVDPGSNLTC
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaccaccaaagcaactctcgtcgacggcggcggcacccctggccgcgctcctg
gtcctggccctcgccgcggccgcggggccgccggcggccgcgcagagctgcgggtgcgcg
ccggacctgtgctgcagccggttcgggttctgcggcacgggccgggactactgcggcgcc
gggtgccagtcgggcccctgcgccgcgccggcgaccaacaacgtgtccgtggccagcgtc
gtcacgccggccttcttcgacgcgctcctcgcgcaggccgcccccggctgcgaggccgcg
ggcttctacacccgcgacgccttcctcgccgccgccggctactacccggccttcggccgc
accggcaccgtcgacgactccaagcgcgagatcgccgccttcttcggcaacgccaaccac
gagaccatcaggttctgctacatcaacgagatcaacgggccgagcaagaactactgcgac
ccgagcaacacgcagtggccgtgccaggccgggaagggctactacgggcgcggcccgctg
cagatctcgtggaactacaactacgggccggcggggcagagcatcggctttgacgggctc
ggcgaccccgacgcggtggcgcgcagcgccgtcgtcgcgttccgggcggcgctctggtac
tggatgaacagcgtgcacgagcccctcgccgccggcggcgggttcggcgccaccatccgg
gccatcaacggcgcgctcgagtgcgacggcaagaaccccagcgccgtcagcagccgcgtc
ggctactacaagcagttctgccaggacttcggcgtcgacccggggagcaacctcacctgc
tga
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