KEGG   Panicum virgatum (switchgrass): 120707827
Entry
120707827         CDS       T07260                                 
Name
(RefSeq) ras-related protein Rab7-like
  KO
K07897  Ras-related protein Rab-7A
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir04144  Endocytosis
pvir04145  Phagosome
pvir04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    120707827
   04145 Phagosome
    120707827
   04148 Efferocytosis
    120707827
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pvir04131]
    120707827
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pvir04147]
    120707827
   04031 GTP-binding proteins [BR:pvir04031]
    120707827
Membrane trafficking [BR:pvir04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab GTPases
    120707827
Exosome [BR:pvir04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   120707827
  Exosomal proteins of other body fluids (saliva and urine)
   120707827
  Exosomal proteins of colorectal cancer cells
   120707827
  Exosomal proteins of bladder cancer cells
   120707827
GTP-binding proteins [BR:pvir04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab7/9 [OT]
    120707827
SSDB
Motif
Pfam: Ras Roc Arf Gtr1_RagA MMR_HSR1 GTP_EFTU RsgA_GTPase AAA_16 ATP_bind_1 Septin nSTAND3 AAA_22 AAA_7 cobW AAA_5 G-alpha NTPase_1 AAA_24 DAP3 Lyx_isomer PduV-EutP NACHT Sigma54_activat nSTAND1 MCM NB-ARC
Other DBs
NCBI-GeneID: 120707827
NCBI-ProteinID: XP_039848786
LinkDB
Position
5K:complement(46282882..46287631)
AA seq 206 aa
MSTSRRRTLLKVIVLGDSGVGKTSLMNQYVHKKFSQQYKATIGADFVTKEVLIEDRLVTL
QIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSNRSFDTLNTWHDEFLNQASPSDPKTFP
FILLGNKIDVDGGKSRVVSEKKAMEWCASKGNIPYYETSAKEDYNVDNAFLSVAKLALEH
ERDQDIYFQAVADPVPETEPRSGCAC
NT seq 621 nt   +upstreamnt  +downstreamnt
atgtcgacgtcgcggaggcgaaccctcctcaaggtcatcgtcctcggcgacagcggggtc
gggaagacgtccctgatgaaccaatatgtccacaaaaagttcagtcagcagtacaaagct
acaattggtgcagatttcgtcacaaaggaggttctcatcgaagacaggctagtgactttg
cagatctgggacacggcagggcaggagagattccagagtcttggtgttgcgttctacaga
ggggcagattgttgtgtgcttgtctatgatgtcaactctaacaggtcattcgatacactc
aacacatggcatgatgagtttctcaatcaagccagcccatcagatcctaaaacttttccg
ttcatcttacttggtaacaagatcgacgtagatggtggaaaaagcagagtggtttctgag
aagaaagcaatggagtggtgtgcttctaaaggcaatattccttattacgaaacttctgca
aaagaggactacaatgttgacaatgcattcctgtctgttgccaagcttgctctagagcat
gagcgtgatcaggacatctacttccaggccgttgctgatcctgtcccagagactgaaccg
aggagtggatgtgcatgctag

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