Panicum virgatum (switchgrass): 120707865
Help
Entry
120707865 CDS
T07260
Name
(RefSeq) chlorophyll a-b binding protein of LHCII type 1-like
KO
K08912
light-harvesting complex II chlorophyll a/b binding protein 1
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00196
Photosynthesis - antenna proteins
pvir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09102 Energy metabolism
00196 Photosynthesis - antenna proteins
120707865
09180 Brite Hierarchies
09181 Protein families: metabolism
00194 Photosynthesis proteins [BR:
pvir00194
]
120707865
Photosynthesis proteins [BR:
pvir00194
]
Antenna proteins
Light-harvesting chlorophyll-protein complex (LHC) - Plant, Green alga [OT]
LHCII
120707865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Chloroa_b-bind
PhosphMutase
Motif
Other DBs
NCBI-GeneID:
120707865
NCBI-ProteinID:
XP_039848854
LinkDB
All DBs
Position
5K:46692485..46693739
Genome browser
AA seq
266 aa
AA seq
DB search
MAASTMSLSSPALAGKAAKIAPSSVFGEGRVTMRKTAAKAKPAAASGSPWYGPDRVLYLG
PLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA
RNGVKFGEAVWFKAGAHIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGG
PLGEVVDPLYPGGSFDPLGLADDPEKFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL
ENLADHIADPVGNNAWAYATNFVPGN
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atggcggcttccaccatgtcgctctcctctcctgctctcgccggcaaggcggcgaagatc
gccccctccagcgtgttcggcgagggccgcgtcacgatgcgcaagacggccgccaaggcc
aagcccgccgcggcgtccggcagcccgtggtacggcccggaccgcgtcctctacctcggc
ccgctatccggcgagccgccgtcctacctcaccggcgagttcccgggggactacggctgg
gacaccgctgggctctcggccgaccccgagacgttcgccaagaacagggagcttgaggtg
atccactgccggtgggccatgcttggcgcgctcggctgcgtcttccccgagctcctcgcc
cggaacggcgtcaagttcggcgaggccgtctggttcaaggccggcgcccatatcttcagc
gagggcggcctcgactacctgggcaaccccagcctcgtgcacgcgcagagcatcctcgcc
atctgggcatgccaggttgtcttgatgggggccgtggagggttacagggtggctggcggg
ccgctcggcgaggtggtcgacccgttgtaccctggagggagcttcgatccgctggggctc
gccgacgacccggagaagttcgcggagctgaaggtgaaggagatcaagaacggccggctc
gccatgttctccatgttcgggttcttcgtgcaggccatcgtcaccggcaaggggcccctg
gaaaacctggccgaccacatcgccgaccccgttggcaacaacgcctgggcgtacgccacc
aacttcgtccccggcaactga
DBGET
integrated database retrieval system
