Panicum virgatum (switchgrass): 120707873
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Entry
120707873 CDS
T07260
Name
(RefSeq) SNAP25 homologous protein SNAP33-like
KO
K18211
synaptosomal-associated protein 25
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120707873
Membrane trafficking [BR:
pvir04131
]
SNARE
SNAP-25 (Qb,c)
SNAP-25
120707873
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
V-SNARE_C
DUF5089
SlyX
DUF7799
BRE1
Motif
Other DBs
NCBI-GeneID:
120707873
NCBI-ProteinID:
XP_039848864
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Position
5K:46847329..46850304
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AA seq
289 aa
AA seq
DB search
MSGKRSFFASKKKATNPFDSDSDDGDKKQQRPARASSVPPPAQQRVALFGAGAGGQERGG
LFSSSEAPRNSHYRNDFRDAGGLESQSVQELEGYAAYKAEETTSRVQGCVRIAEEMRDTA
SKTLVTVHQQGQQIHRTHMMAVDIDQDLSRSEKLLGDLGGLFSKKWKPKKNGTIKGPMLS
RDDSFIRRGGHLEQRQKLGLVDHPPRLDARKFHSEPTSALEKVEMEKAKQDDALSDLSDI
LTELKGMAIDMGSEIERQTKSMGDAEKDYDELNFRVKGANTRARHLLGR
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgagcgggaagcgatccttcttcgcatccaagaagaaggccaccaatcctttcgattcc
gactccgacgacggcgacaagaagcagcagcggccggcgcgggcctcctccgtgccgccc
ccggcccaacagcgggtcgccctcttcggcgccggcgccggcggccaagaaaggggcggg
ctcttctcctcctcggaggcgccgaggaacagccactaccgaaacgacttccgcgacgct
ggcggcctggagagccagtcagttcaggagctggagggctacgcggcgtacaaggccgag
gagaccacaagccgggttcagggatgcgtcagaatagccgaggagatgagggataccgcg
tccaagaccctcgtcaccgtccaccaacaggggcagcagatccaccgcacgcacatgatg
gccgtcgacatcgaccaggacctctccaggagtgagaagctcttgggtgatcttgggggc
ctattttccaagaagtggaagccaaagaaaaacggcacaatcaagggtcctatgctatct
agagatgactccttcataagaaggggcggtcatttggagcaaaggcagaaattagggctg
gtcgatcatcctcctcgattggatgcgcgcaaatttcattctgaaccgacatcggcactt
gagaaagttgagatggagaaagcaaagcaggatgatgctctgtctgatctaagcgacata
ctgaccgagctgaaagggatggccattgacatgggctctgagattgagaggcaaacaaag
tcaatgggagatgcagaaaaggattatgacgagctgaacttcagggttaagggagcaaac
actcgagctcgccatctgcttggcagataa
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