Panicum virgatum (switchgrass): 120707969
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Entry
120707969 CDS
T07260
Name
(RefSeq) ubiquitin-like-specific protease 1D
KO
K16287
ubiquitin-like-specific protease 1C/D [EC:
3.4.22.68
]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvir04121
]
120707969
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.68 Ulp1 peptidase
120707969
Ubiquitin system [BR:
pvir04121
]
Deubiquitinating enzyme (DUB)
UBL-specific proteases (ULPs)
120707969
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Peptidase_C48
Motif
Other DBs
NCBI-GeneID:
120707969
NCBI-ProteinID:
XP_039848963
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All DBs
Position
5K:complement(47726596..47733603)
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AA seq
607 aa
AA seq
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MAAPKGGIAIDWQAMDPNFPAAELEVVSSLSPPFTPHPPAAASAHDDNDDGGGEVKFANS
TDQELEAKIRYWEGKSQQGVLRKTHDNGEKMRALVGRMKKELERRRVDRQKKDDTVRRQA
VQDKSTCGTMGDAYDFNPDDEVLDNTAGKHYKKLNCNSSTKTYTQVKGAACKEGNSLTHG
KCAYPVMGPKKDGRIAKYSANHQLKTSARLPKSTDCELLDTDIDTRKKSTLRSCTTNPQE
KNTVDSKGMSTKFLEENATCGSCKRLNLTKNKASASFKCKKDVFLLDDDDDTEHPKSAAD
VEISNKRDESKIYYPSRTDPEAVELTYSDMKCLEPEEYLKSPVINFCLQYLKKSRHRGDL
YMFNTYFYSKLKEALSTLGDGDTQFSKLRRWWRNVDIFKKAYIILPINEMMHWSLIIVCM
PTKEGDSGPVMLHMDSLGLHNSQKLFDTVARYLEAEWRHLQKDSSYDIPFSGMIWKHLSR
NIKEEKVEVPRQRNEYDCGLFMLHYIDKFIQEAPERFTNGSLGMFGRKWFNREEASLLRE
GVRARLFDLFQTAEEDDGPSEAKWRAGDHSEGQDKDADTVMAAALESGCQMNGTLPAASS
DMVIDEL
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgccgaaaggtgggatcgccatcgattggcaggcgatggaccccaacttcccc
gcggcggagttggaggtcgtcagctctctctctccgcccttcacgccgcatcccccggcg
gcggcgagcgcccacgacgacaacgatgatggcgggggcgaggtgaagttcgcgaactcc
accgatcaggaactggaggcgaagattagatattgggaggggaagtcgcagcagggtgta
ctccggaagacgcacgacaatggtgaaaagatgcgggcactcgtcgggcggatgaagaag
gagcttgaacgccggcgagtcgataggcagaagaaggatgacacagttcggagacaggca
gtgcaagataagtctacctgtggtaccatgggagatgcctatgacttcaatccggatgat
gaagttttggacaatacggctggcaaacactataagaaattaaattgtaattcatctaca
aagacatatacccaggttaagggcgcagcatgtaaagaaggaaattctttaacccatggc
aaatgtgcttaccctgtcatgggcccaaagaaagatggtcgaatagcaaaatattcagcg
aatcatcaactgaaaacttctgcacgtcttccaaagagtacagattgtgaacttttagat
acggatattgacacaagaaagaaatcaactttaaggagctgcaccacaaatcctcaggaa
aagaacactgtcgactcaaagggcatgtccaccaaatttcttgaagaaaatgccacatgt
ggtagttgcaagaggttaaaccttacaaaaaacaaggcctccgcatcctttaagtgtaaa
aaggatgtttttctcttggatgatgatgatgatacagagcatcctaaatctgctgctgat
gttgagatatctaataaacgggatgagtcaaagatctactatccttcaagaactgatccc
gaagctgttgagctgacttattctgacatgaaatgtctcgaacctgaagaatatttgaaa
tcacctgttataaatttttgccttcagtacctcaagaaatcaagacatcgcggtgacttg
tacatgtttaacacatatttctatagcaaacttaaagaagcactatccacactgggtgac
ggtgacacacaattcagcaagttacggagatggtggagaaatgtagatatttttaagaaa
gcatacataattttgccgattaatgaaatgatgcactggagcttgatcatcgtttgtatg
cctacaaaagagggagattcaggtccagttatgcttcacatggactctcttgggcttcac
aacagtcaaaagctttttgacacagttgcgagatatcttgaagcagaatggcggcatcta
cagaaggattcttcttatgacattccattttcagggatgatatggaagcatctttcaaga
aatataaaggaggaaaaggttgaggtgccacgtcagcgtaacgagtatgactgtggcctc
tttatgcttcattacattgacaagtttattcaagaggcgccagagaggtttacaaatggg
agtcttggcatgtttggacgcaaatggttcaaccgtgaagaagcgtcattgctacgagag
ggggtacgggcacgtctgttcgatttatttcagactgcggaagaggatgatgggccatca
gaggcaaagtggcgtgcaggcgatcattctgaaggacaagacaaggatgcagacacagtc
atggctgcagcacttgaatccgggtgccaaatgaacggaacgttgcctgctgcttccagc
gacatggtgatcgatgaactctga
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