Panicum virgatum (switchgrass): 120708013
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Entry
120708013 CDS
T07260
Name
(RefSeq) villin-2-like
KO
K05761
villin
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pvir04812
]
120708013
Cytoskeleton proteins [BR:
pvir04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Gelsolin / villin
120708013
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Gelsolin
VHP
DUF1631
Motif
Other DBs
NCBI-GeneID:
120708013
NCBI-ProteinID:
XP_039849026
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All DBs
Position
5K:complement(48084096..48092570)
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AA seq
978 aa
AA seq
DB search
MSTAKVLDPAFQGVGQKVGTEIWRIEDFKPVALPKSDYGKFYCGDSYIVLQTSCTKGGAY
LYDIHFWIGKDSSQDEAGTAAIKTVELDAVLGGRAIQHRELQGYESDKFLSYFKPCIIPL
EGGFASGFKKPEEEKFETRLYICRGKRAIRVKEVPFARSSLNHDDVFVLDTENKLYQFNG
ANSNIQERAKALEVIQYLKEKYHGGVCDVAIVDDGKLQAESDSGEFWVLFGGFAPIGKKP
VSDDDVVLETTAPKLYSINDGQMKLEEAALTKAMLENTKCFLLDCGAEIYVWVGRVTQME
DRKSATKAVEEFLINQKRPKTTRVTQVIQGYESHAFKSKFESWPMGNAAGSPGVEEGRGK
VAALLKQQGVKGAAKNTAPVNEEVPPLLEGGGKLEVWCVDGNAKTALPKEDIGKFYSGDC
YIILYAYHSGDKKEEYYLSYWIGKDSLADDQAMASQSANTMWNSLKGRPVLGRIYQGKEP
PQFVALFQPMVILKGGIGSGYKKLVEEKGVTGETYSSEGIALFRVSGTSTHNNKILQVDA
VATSLSPTECFVLQSGNAMFTWLGNSSTYEQQQWAAKVAEFLKPGVAVKHCKEGTESSAF
WFALGGKQSYTNRNATQDIIAREPHLYAFSFKNGRLEVTEIFNFSQDDLLTEDMMILDTH
GEVFIWIGQCVESKEKQKAFEIGQKYIEHANSIEDLSSYVPLYKVMEGNEPCFFKTYFYW
DNIKSVVHGNSFQKKLSLLFGFRSEGAPRSSGNGGPTQRASALAALSSAFNPSSQQKLSN
ERPKSTGDGPTQRASALAALSNAFNPSSKPKTPTPPPSRSGQGSQRAAAVAALSSVLTAE
QSGSSENLRAKASSTADKTDVDRVVITQSGASSPQSEAGESSVFHQEKDVVDGAPSEADG
AEAEAPEEETTENVGEATFSYDRLISKSTDPVRGIDYKRREAYLSDSEFQTVFGMTKDAF
YQQPNWKQELQKRKADLF
NT seq
2937 nt
NT seq
+upstream
nt +downstream
nt
atgtcaactgcaaaagtgctagatcctgctttccaaggagttggccagaaagttgggaca
gaaatatggcgtattgaagattttaaaccagttgcattgccaaaatctgattatggtaaa
ttctactgtggagattcatacatagttctgcagacatcctgtaccaaaggcggcgcgtat
ctgtatgatatccacttctggattgggaaagattcaagtcaagatgaagctgggactgcg
gccatcaagacagttgaactggatgccgtccttggaggtcgtgcaatccaacatagggaa
ctccaaggttatgaatctgacaaattcttgtcatacttcaagccttgcattatacctttg
gagggcggttttgcttctgggttcaaaaagcctgaagaggagaagtttgaaacacggctg
tatatttgcagagggaagagagctatacgagttaaagaggttcccttcgcccggtcatcg
ttaaatcacgatgacgtgtttgtcttagatactgaaaataagttataccaatttaatggt
gctaactccaatatccaagaaagggccaaagcattggaagtgatccaatatttaaaggag
aaatatcatggtggtgtgtgtgatgttgcaattgtagatgatgggaagttacaagcagaa
tcagactctggtgaattctgggtcctttttggaggttttgcaccaatagggaaaaaacct
gtgagtgatgacgatgttgttcttgaaactacggcaccaaagctctacagcatcaatgat
ggtcaaatgaagctggaagaggcagctcttacaaaagctatgcttgaaaataccaaatgt
ttcttacttgattgtggtgctgaaatatatgtatgggtcggccgggtaactcaaatggag
gatagaaaatctgccactaaagcagttgaggaattccttattaatcaaaagcgtccaaag
acaacaagagttacacaagtcattcaaggttatgagagtcatgctttcaagtccaagttt
gaatcatggccaatgggcaatgctgctgggagccctggcgtagaggaagggaggggaaaa
gttgcagctttgttgaaacaacaaggtgtaaagggagctgcaaaaaacaccgctccagta
aatgaggaagttcctcctttgcttgaaggcggtggaaagctcgaggtatggtgtgttgat
ggcaacgctaagactgctctgccgaaagaggacatcggaaagttttacagtggagactgt
tatatcattctctatgcatatcattcaggcgacaagaaagaagaatactatctcagttac
tggattgggaaggatagtttggcggatgatcaagcgatggcatctcagtcagctaataca
atgtggaattcgttgaaaggacggcctgttctgggtcgcatataccaagggaaggagcca
ccacaatttgttgctcttttccagcccatggttatcttgaagggtggaattgggtccggg
tacaagaagcttgtagaagaaaagggtgtgactggtgagacttattcttccgaaggcatt
gctctatttcgagtatctgggacatcgacccacaacaacaagattcttcaagttgatgcg
gtggcaacatctttaagcccaacagagtgtttcgtattgcaatctggaaatgctatgttt
acgtggcttggcaattctagcacatatgagcaacagcagtgggcagcaaaagttgctgaa
tttttgaagcctggtgttgcagtgaagcattgcaaggaggggacagagagttctgctttc
tggtttgcacttggtgggaaacagagttatacaaacagaaatgctactcaggatattatt
gctagagagcctcacttatatgcattctcattcaagaatgggagattggaggttactgag
atcttcaacttctcccaagatgatttgttaactgaagacatgatgatactggacacacat
ggtgaggtcttcatttggattggtcaatgtgtggaatcaaaagagaagcagaaggcattt
gaaattggccagaaatacatagagcatgcaaattctattgaagatctttcttcatatgta
ccactatataaagtcatggaagggaatgagccatgcttcttcaagacgtacttctattgg
gacaacataaaatctgtggttcatgggaattccttccagaagaaactctcgctacttttt
ggatttcgttctgagggtgcacctaggagctctggtaatggtggacccactcagagggca
tctgcattagcagctctatcatctgcatttaatccatcatcccaacaaaagctgtctaat
gagaggcctaaaagcacaggcgatggacccactcaacgtgcctctgcacttgctgcctta
tcaaatgcatttaatccgtcctcaaaacccaaaactcccaccccacctccatctcgttca
ggtcaaggatctcaaagagcagctgctgtagctgcattgtcctctgtgctgactgctgag
caatctggatcttcagaaaatctacgagccaaggctagcagcacagcagataagacagat
gtcgacagggttgtaataactcaatctggtgcatcttctcctcagtctgaagctggggag
tcctctgtgtttcaccaagaaaaagatgttgtagatggggcaccatctgaggctgatgga
gcagaggctgaggccccagaggaagaaacaacagagaatgtgggtgaagcaacctttagc
tatgaccgcttgatatccaagtccactgatcctgttcgtgggatagattacaaacgcaga
gaggcatacttatcagatagcgagtttcaaactgtttttggcatgactaaggatgcattc
taccaacagccaaattggaagcaagaactgcagaagcgaaaagctgatctcttctga
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