Panicum virgatum (switchgrass): 120708044
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Entry
120708044 CDS
T07260
Name
(RefSeq) probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 7
KO
K16055
trehalose 6-phosphate synthase/phosphatase [EC:
2.4.1.15
3.1.3.12
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00500
Starch and sucrose metabolism
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
120708044
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pvir01003
]
120708044
Enzymes [BR:
pvir01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.15 alpha,alpha-trehalose-phosphate synthase (UDP-forming)
120708044
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.12 trehalose-phosphatase
120708044
Glycosyltransferases [BR:
pvir01003
]
Others
Trehalose
120708044
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_20
Trehalose_PPase
Hydrolase_3
Motif
Other DBs
NCBI-GeneID:
120708044
NCBI-ProteinID:
XP_039849069
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All DBs
Position
5K:complement(48459977..48464789)
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AA seq
905 aa
AA seq
DB search
MMSRSYTNLLDLAEGNFAALGLAGGGARRRQGSFGLKRMSRVMTVPGTLSELDGEDESEP
AATNSVASDAPSSLAADRMIVVSNQLPVVARRRPDGRGWSFSWDEDSLLLQLRDGIPDEM
EVLFVGSLRADVPVAEQDEVSQALLDRFRCVPVFLPDHLNDRFYHGFCKRQLWPLFHYML
PFSSSASATTASSSPGNGRFDRSAWEAYVLANKFFFEKVVEVINPEDDYVWVHDYHLMVL
PTFLRRRFNRLRIGFFLHSPFPSSEIYRTLPVREEILKALLNCDLIGFHTFDYARHFLSC
CSRMLGIEYQSKRGYIGLDYFGRTVGIKIMPVGIHMGQLQSGLRLPDREWRLSELQQQFE
GKTVLLGVDDMDIFKGINLKLLAFENMLRTHPKWQGRAVLVQIANPARGKGKDLETIQAE
IEESCRRINGDFGQSGYSPVVFIDRDVSSVEKIAYYTIAECVVVTAVRDGMNLTPYEYIV
CRQGAPGSESTSEVSGPKKSMLVVSEFIGCSPSLSGAIRVNPWNIEATAEGMNEAISMPE
QEKQLRHEKHYRYVSSHDVAYWSRSFTQDLERACKDHFRRTCWGIGLGFGFRVVALDPHF
TKLNIDSIVNAYEISESRAILLDYDGTLVPQTSINKPPSPEVVSTINTLCSDRRNIVFLV
SGRDKDTLGEWFASCPKLGIAAEHGYFLRWSRDEEWQTCTQALDFGWMEMAKPVMNLYTE
ATDGSSIETKESALVWHHQDADPGFGSSQAKELLDHLESVLANEPVTVKSGQFIVEVKPQ
GVSKGVVAERILASMKEGGKQADFVLCIGDDRSDEDMFENIADIMKRNMVAPRTPLFACT
VGQKPSKAKFYLDDTFEVVTMLSALADATEPELETDSADELAASTSSLDIGDEQSESTDR
PIGGS
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcgcggtcgtataccaacctgctcgatctcgcggagggcaacttcgcggcgctg
ggcctggccggcggcggggcgcggcggaggcaagggtcgttcgggctgaagcggatgtcg
cgggtgatgacggtgccggggacgctgtcggagctcgacggcgaggacgagtcggagccc
gcggcgaccaacagcgtcgcctccgacgcgccctcttcgttggcggccgaccggatgatc
gtcgtctccaaccagctgcccgtcgtcgcgcggcggcggcccgatggccggggatggtcc
ttctcctgggacgaggactcgctgctcctccagctccgcgacggcattcccgacgagatg
gaggtgctctttgtcggctccctccgcgccgacgttcccgtagccgagcaggacgaggtg
tcgcaggcgcttctcgatcgattccgctgcgtgccggtgttcctccccgaccacctcaac
gaccgcttctaccacggcttctgcaagcgccaactctggcctctattccactacatgctc
cccttctcatcatccgcgtccgccaccaccgcctcttcatcgcccggcaacggtcgattc
gaccgtagcgcttgggaggcgtacgtgctcgccaacaagttcttcttcgagaaggtcgtt
gaggttatcaacccggaggacgactacgtctgggttcatgactaccacctcatggtgctg
cctaccttcctccgccgccggttcaaccgcctccgaatcggattcttcctccacagcccc
ttcccttcgtcagagatctaccgcaccctccctgttcgtgaggagatattgaaggctttg
ctcaattgtgacctcattgggtttcacacttttgattacgccaggcacttcctctcgtgc
tgcagtagaatgctgggaattgaataccagtcaaagcgtgggtacattggattggattac
tttggccgcactgttgggatcaaaatcatgccagtgggaattcatatgggtcaattgcag
tcaggtctgcgcttgcctgacagggaatggaggctttctgagcttcaacagcagtttgag
gggaaaactgtcttgcttggtgtggatgatatggatatcttcaaggggatcaatttgaag
cttcttgcctttgagaatatgctgaggacccatcccaagtggcagggccgggcagtatta
gtgcagattgctaacccagcccgtgggaagggtaaggatctggaaaccatccaggctgag
attgaggagagctgccggaggattaatggggactttggccagtcagggtatagccctgtt
gttttcattgatcgtgatgtgtcaagtgttgagaagattgcctattatacaatagcagaa
tgtgtggtggtgactgctgtgagggatgggatgaacttgacaccatatgaatacattgtc
tgtaggcagggtgctccaggatccgagtccacatcagaggtgagtgggccaaagaagagc
atgctggttgtgtcagagtttattggctgctcaccgtcgttgagtggtgctattcgggtt
aacccatggaatatagaggcaaccgcagaggggatgaatgaggccatttcaatgcctgaa
caggaaaaacaattgaggcatgagaagcattaccgttatgtcagcagccatgatgttgct
tactggtcaaggagcttcacccaagacttggaaagggcttgtaaggaccactttaggagg
acttgttggggcatagggttgggattcggtttcagggtggtggccttggaccctcatttc
acaaagcttaacatagattcaattgttaatgcttatgaaatttcggagagcagggctatt
ttgcttgactatgatggaactttggttcctcagacttccatcaacaagccacctagccca
gaagttgtgagtactatcaataccctttgctcagataggagaaatattgtttttcttgtc
agtgggcgagacaaggatacgttgggagagtggtttgcctcatgtccaaagctggggatt
gcagctgaacatggttactttttaaggtggtctagagatgaggagtggcaaacctgcacc
caagctttggactttggttggatggaaatggcaaagccagtgatgaatttgtacacagaa
gcaactgatggatcctccattgagaccaaggaaagtgctttggtgtggcaccatcaggat
gctgacccaggctttggatcatcacaggcaaaggaattgcttgatcacctggaaagtgta
ctagcaaatgaaccagtcactgttaaaagtggccagttcattgttgaagtgaaacctcag
ggcgtaagcaagggagtagttgctgagaggatacttgcatcaatgaaggagggaggaaag
caggctgatttcgtactgtgtattggtgatgacaggtccgatgaggacatgtttgagaac
attgccgatatcatgaagaggaatatggttgctccgagaacaccactgtttgcgtgtact
gtgggacaaaaaccaagcaaagccaaattctacctggacgatacattcgaagtggtcacc
atgctgagcgcactggcagatgccacagaacctgaactggagactgattcggctgatgaa
ttggccgcatctacttcatcactcgacattggtgatgaacaatcagaatccactgataga
ccaattggaggatcttag
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