Panicum virgatum (switchgrass): 120708051
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Entry
120708051 CDS
T07260
Name
(RefSeq) cellulose synthase A catalytic subunit 4 [UDP-forming]
KO
K10999
cellulose synthase A [EC:
2.4.1.12
]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pvir01003
]
120708051
Enzymes [BR:
pvir01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.12 cellulose synthase (UDP-forming)
120708051
Glycosyltransferases [BR:
pvir01003
]
Polysaccharide
Structural polysaccharide
120708051
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cellulose_synt
Glyco_trans_2_3
zf-UDP
Motif
Other DBs
NCBI-GeneID:
120708051
NCBI-ProteinID:
XP_039849076
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All DBs
Position
5K:48536763..48542317
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AA seq
981 aa
AA seq
DB search
MESAAAVPCAACGDDACAACRACSYALCRACLDEDAAEGRATCARCGGEYAAAADPAHGN
AGAEADEVEDHHAGGGLRERVTMGSHLNDRQDEVSHGRTMSSLSGIGSELNDESGKPIWK
NRVESWKEKKNEKKASAKKAAAKAQAPPVEEQIMDEKDLTDAYEPLSRIIPISKNKLTPY
RAVIIMRLIVLGLFFHYRITNPVYSAFGLWMTSVICEIWFGFSWILDQFPKWCPINRETY
VDRLIARYGDGDDSGLAPVDFFVSTVDPLKEPPLITANTVLSILAVDYPVEKISCYVSDD
GSAMLTFESLAETAEFARKWVPFCKKYAIEPRTPEFYFSQKIDYLKDKIHPSFVKERRAM
KRDYEEYKVRINALVAKAQKTPEEGWIMQDGTPWPGNNPRDHPGMIQVFLGETGARDFDG
NELPRLVYVSREKRPGYQHHKKAGAMNALVRVSAVLTNAPYILNLDCDHYVNNSKAVREA
MCFMMDPTVGRDVCYVQFPQRFDGIDRSDRYANRNVVFFDVNMKGLDGIQGPVYVGTGCC
FFRQALYGYGPPSLPALPKSSICSWCCCCCPKKKVERSEREINRDSRREDLESAIFNLRE
IDNYDEYERSMLISQMSFEKTFGLSSVFIESTLMENGGVPESANPSTLIKEAIHVISCGY
EEKTEWGKEIGWIYGSVTEDILTGFKMHCRGWRSIYCMPVRPAFKGSAPINLSDRLHQVL
RWALGSVEIFLSRHCPLWYGYGGGRLKWLQRLSYINTIVYPFTSLPLIAYCCLPAICLLT
GKFIIPTLSNAATIWFLGLFMSIILTSVLELRWSGIGIEDWWRNEQFWVIGGVSAHLFAV
FQGILKMIAGLDTNFTVTAKATDDTEFGELYVFKWTTVLIPPTTILVLNLVGVVAGFSDA
LNSGYESWGPLFGKVFFAMWVIMHLYPFLKGLMGRQNRTPTIVVLWSVLLASVFSLLWVK
IDPFVGGTEPVNGTNCNTVIC
NT seq
2946 nt
NT seq
+upstream
nt +downstream
nt
atggagtcggcggcggccgtgccgtgcgcggcgtgcggggacgacgcgtgcgcggcgtgc
cgcgcgtgcagctacgcgctctgcagggcctgcctcgacgaggacgccgccgagggacgc
gccacgtgcgcgcgctgcggcggggagtacgccgccgcggccgacccagcgcatggcaac
gcgggcgctgaagcggacgaggtggaggaccaccacgccggcggcggcctgcgtgagagg
gtcaccatgggcagccacctcaatgatcgccaggatgaagtaagccatggcaggaccatg
agcagcttgtcgggaattggtagtgaactgaatgatgaatctggaaaacccatctggaag
aacagggtggagagttggaaggagaagaagaatgagaaaaaagcctcagccaaaaaggct
gcagcaaaagcccaggcaccacctgtggaagaacagatcatggatgaaaaggatttgaca
gatgcgtatgagccactctcccggatcatccctatatcaaagaacaagctcacaccttac
agagcggtcatcattatgcgtttgatagttcttgggctcttctttcactaccgtatcacc
aatcctgtttacagtgcctttggtctctggatgacatcagtcatatgtgagatctggttt
ggtttctcctggatcttggatcaattccccaagtggtgccctatcaatcgagagacttat
gttgataggctgattgcaagatacggagatggtgacgattctggattggcacctgtggat
ttctttgtcagtacagtggatccattgaaagagcctccactgatcactgcaaacaccgtg
ttgtctattcttgctgtggactatcctgttgagaagatctcatgctatgtatccgatgat
ggttctgctatgctcacatttgaatcacttgctgagactgctgaatttgctagaaaatgg
gttccattttgcaagaagtatgccattgagccacgaactcctgagttctatttctcgcag
aagattgactacttgaaggacaagatacacccatcttttgtcaaggagcgtagggctatg
aagagagactatgaagaatacaaggtgaggataaacgctttggtcgccaaggctcagaag
acacctgaggaaggctggatcatgcaagacggtacaccatggcctgggaataatcctcgt
gaccaccctggcatgatccaggttttccttggtgagactggtgcccgggactttgatgga
aatgaacttcctcgtttagtgtatgtttcaagagaaaaaagaccaggctaccaacaccac
aagaaggctggggccatgaatgctctggttcgagtgtctgctgtcctgacaaatgctcct
tacattcttaatcttgattgtgatcactatgttaacaacagcaaagccgtccgtgaagca
atgtgcttcatgatggaccctactgttggcagagatgtctgctatgtacaattcccacag
aggttcgatggcattgatcgcagtgatcgatacgccaataggaatgttgtgttctttgac
gttaacatgaaaggacttgatggcattcaaggccccgtttatgtgggaactggttgttgt
ttctttaggcaagcactgtatggttatggacctccatctctgcctgccctcccaaaatct
tcgatttgttcgtggtgttgctgttgctgtcccaagaagaaggttgaaagaagtgagaga
gaaatcaacagggactctcggcgagaagaccttgagtctgctattttcaatcttcgggaa
attgacaactacgatgagtatgagaggtccatgcttatctctcagatgagttttgagaag
acttttggcctgtcctcagtattcattgaatcaactcttatggagaatgggggcgtccct
gaatctgcaaacccatctactctaattaaagaagccattcatgtcattagctgtggatat
gaagagaaaactgaatggggaaaagagattggctggatctacggttcagttacagaggat
attctgactgggttcaagatgcactgccgtggctggagatccatctactgcatgccggtg
agacctgcattcaagggatcagcccctatcaatctttccgatcgtctgcaccaggttctc
cggtgggctcttggttctgttgagatcttcctgagtcggcactgcccgctgtggtacggt
tacggtggtggccgtctgaaatggctccagaggctatcctacatcaacaccatcgtctac
ccgttcacttctcttcctcttattgcctactgttgcctgcctgccatttgcctgctcacc
ggaaagttcatcattccaacgctgtccaacgccgcgacaatatggtttcttggcctcttc
atgtccatcatcttgacgagcgtgttggagctgcggtggagtggcatcggcatcgaggac
tggtggcgcaacgagcagttctgggtcatcggaggcgtgtccgcgcacctgttcgccgtg
ttccagggtatcctcaagatgattgccgggctggacaccaacttcacggtcacggccaag
gcgacggacgacaccgagttcggcgagctgtacgtgttcaagtggacgacggtgctgatc
ccgccgaccaccatcctggtgctcaacctggtgggcgtggtggccgggttctcggacgcg
ctcaacagcggctacgagtcgtggggcccgctcttcggcaaggtgttcttcgccatgtgg
gtgatcatgcacctgtacccgttcctcaagggtctcatgggccgccagaaccgcacgccc
accatcgtcgtgctctggtccgtcctgctcgcctccgtcttctccctcctctgggtcaag
atcgaccccttcgtcggaggcaccgagcctgtcaacggcaccaactgcaacacagtcatc
tgctga
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