KEGG   Panicum virgatum (switchgrass): 120708053
Entry
120708053         CDS       T07260                                 
Name
(RefSeq) ras-related protein Rab7
  KO
K07897  Ras-related protein Rab-7A
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir04144  Endocytosis
pvir04145  Phagosome
pvir04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    120708053
   04145 Phagosome
    120708053
   04148 Efferocytosis
    120708053
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pvir04131]
    120708053
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pvir04147]
    120708053
   04031 GTP-binding proteins [BR:pvir04031]
    120708053
Membrane trafficking [BR:pvir04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab GTPases
    120708053
Exosome [BR:pvir04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   120708053
  Exosomal proteins of other body fluids (saliva and urine)
   120708053
  Exosomal proteins of colorectal cancer cells
   120708053
  Exosomal proteins of bladder cancer cells
   120708053
GTP-binding proteins [BR:pvir04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab7/9 [OT]
    120708053
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 GTP_EFTU Gtr1_RagA ATP_bind_1 RsgA_GTPase AAA_16 nSTAND3 AAA_7 Septin AAA_24 AAA_22 cobW NTPase_1 ATPase_2 PduV-EutP SRPRB MCM AAA_14 NACHT ATP-synt_ab G-alpha NB-ARC DAP3
Other DBs
NCBI-GeneID: 120708053
NCBI-ProteinID: XP_039849078
LinkDB
Position
5K:complement(48553620..48556953)
AA seq 206 aa
MASRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ
IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF
VLLGNKVDIDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGTNVEDAFQCIVKNALKNE
PEEELYVPDTVDVVGGNRAQRSSGCC
NT seq 621 nt   +upstreamnt  +downstreamnt
atggcctcgcgacggcgcacgctcctcaaggtcatcatcctcggcgacagcggggtcggg
aagacttcgctgatgaaccaatatgtgaacaagaagttcagcaatcagtacaaggctacg
atcggcgccgacttcctcaccaaggaggtgcagttcgaggacaggctcttcactcttcag
atatgggatactgctggacaggaaaggtttcagagtcttggtgttgcattctatcgtgga
gctgattgttgtgttctagtttatgatgtcaactctatgaaatcatttgataatctgaac
aactggcgtgaagaatttctaattcaggctagcccatctgatcccgataacttccctttt
gttctgcttggaaacaaagttgatattgatggtggcaacagccgtgtggtctctgagaaa
aaggcaaaggcttggtgtgcctcaaaaggcaacataccttactttgagacatctgccaaa
gaaggaactaatgtggaagatgcttttcaatgcattgtaaaaaatgccctgaagaatgaa
cctgaagaagaattgtatgtgcctgacactgtcgatgtggtgggtggcaaccgggcccaa
aggtcatcaggctgctgttaa

DBGET integrated database retrieval system