Panicum virgatum (switchgrass): 120708110
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Entry
120708110 CDS
T07260
Name
(RefSeq) serine/arginine-rich splicing factor RSZ23 isoform X1
KO
K12896
serine/arginine-rich splicing factor 7
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120708110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pvir03041
]
120708110
Spliceosome [BR:
pvir03041
]
Common components
Common spliceosomal components
SR proteins
120708110
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
zf-CCHC
RRM_7
Motif
Other DBs
NCBI-GeneID:
120708110
NCBI-ProteinID:
XP_039849159
LinkDB
All DBs
Position
1K:complement(40670812..40675345)
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AA seq
237 aa
AA seq
DB search
MARVYVGNLDPRVTAREIEDEFRTFGVLRSVWVARKPPGFAFIDFDDRRDAQDAIRELDG
KNGWRVELSTKAGGGRGRDRNGSDMKCYECGETGHFARECRLRIGSGGLGSGRRRSRSPR
YRSRSRSRSRSPRYRRSPSYGRRSYSPRDRSPRRRSYSRSPPPRARSLSRSPPPARARSY
SRSPPPPPPRNNSRSPPATRVLSRSPPPPPARSRSRSYSRSPGQQPQRDESPYGNDA
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atggctcgcgtctacgtggggaacctggatccgcgcgtcacggcgcgggagatcgaggac
gagttccgcacgttcggggttctgaggagtgtatgggttgctagaaaaccaccaggattt
gccttcattgactttgatgaccgcagggatgcacaagatgccattcgtgaactggatggt
aagaatggatggagggttgagctgtcaaccaaagctggtggtggacgtggccgagaccgt
aacggttctgatatgaagtgctatgagtgtggtgaaactggtcactttgcacgtgaatgt
cgcttacggattggttccggaggcttgggtagtggaaggcgccggagccgaagtcctaga
tatcgcagtcgtagccgcagccgcagccgcagcccaagatatcggaggagcccaagctat
ggcagaaggagctacagcccacgggatcgttctcctaggaggcggagttacagtaggtct
ccacctcctcgtgcacggagtctcagcaggtcgcctccacccgctcgtgcaaggagctac
agcaggtcgccaccaccaccgcctccgagaaacaacagcaggtcaccaccagcaacccga
gtactgagcaggtcgcctccgccaccacctgccaggagcaggagcaggagctatagcagg
tccccagggcagcagccccaacgcgatgaatccccatacggcaatgatgcctga
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