Panicum virgatum (switchgrass): 120708182
Help
Entry
120708182 CDS
T07260
Name
(RefSeq) lipoyl synthase 1, chloroplastic
KO
K03644
lipoyl synthase [EC:
2.8.1.8
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00785
Lipoic acid metabolism
pvir01100
Metabolic pathways
pvir01240
Biosynthesis of cofactors
Module
pvir_M00881
Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H
pvir_M00882
Lipoic acid biosynthesis, eukaryotes, octanoyl-ACP => dihydrolipoyl-H
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
120708182
Enzymes [BR:
pvir01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.8 lipoyl synthase
120708182
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
LIAS_N
DAZAP2
Motif
Other DBs
NCBI-GeneID:
120708182
NCBI-ProteinID:
XP_039849244
LinkDB
All DBs
Position
5K:49826022..49830259
Genome browser
AA seq
364 aa
AA seq
DB search
MQNSLARPLRPPVWVGRGGSGDPRGSVSVVRCRAEAAPPVGTAARAPVGPYTGRDPEVKK
PAWLRQRAAQGEKYARLRESIGELKLNTVCVEAQCPNIGECWNGGGGAGGEGDGIATATI
MVLGDTCTRGCRFCAVKTSNKPPPPDPLEPLNTALAVASWGVDYVVLTSVDRDDLPDGGS
SHFAQTVKALKELKPGILVECLTSDFRGDLEAVSSLANSGLDVYAHNIETVRSLQRIVRD
PRAGYDQSMAVLKHAKNCREGMITKSSIMLGLGETDEEVRQTMMDLRAIGVDILTLGQYL
QPTERHLTVREYVTPEKFQFWKEYGESVGFRYVASGPLVRSSYRAGELFVQNLVRNSKTA
SSSS
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgcagaactctctcgcgcggccgctgcgtccaccggtatgggttggtcgcggtgggagc
ggcgacccgcgcggctcggtctccgtggtgcggtgccgcgccgaggcggcgccgccggtg
ggcacggcggctagggcgccggtggggccgtacaccgggagggaccccgaggtgaagaag
cccgcgtggctgcggcagcgggcggcgcagggggagaagtacgcgcgcctgcgggagtcc
atcggcgagctcaagctcaacaccgtctgcgtcgaggcgcagtgccccaacatcggcgag
tgttggaacggaggcggaggggccggcggggaaggggatggcatcgcgacggccacgatc
atggtgctcggcgacacttgcacgcgcggctgccggttctgtgctgtgaagaccagcaac
aagccgccaccccctgatcccctggagcctctgaacacggctttggctgttgcaagctgg
ggagtagattatgttgtgctaaccagcgtcgatagagatgacttacctgacggtggaagt
agccattttgctcagacagtgaaagctttaaaggaactcaaacctgggatactggtggag
tgcttaacctctgatttccgaggtgacctggaagctgtctcatctttggcaaactccggt
ctagatgtctatgcgcacaacattgaaacagtgaggagtctacagcgaattgtgagggat
cctcgagcaggatatgatcagagcatggcagttctcaagcatgcaaaaaattgcagggag
ggcatgattacaaagtcttcaatcatgcttggtcttggagagactgatgaggaggtgaga
caaaccatgatggacttacgggccattggtgttgatattcttactttgggccagtattta
cagccaacagaaagacatttaacagtaagggagtatgtgactcctgagaagttccagttt
tggaaggagtatggagagtcggtgggtttccgttatgttgccagcggacccttggttcgg
tcttcataccgtgcaggagagctctttgtccaaaatttggtcagaaatagcaaaacggca
tcttcctcgtcttaa
DBGET
integrated database retrieval system
