KEGG   Panicum virgatum (switchgrass): 120708214
Entry
120708214         CDS       T07260                                 
Name
(RefSeq) signal recognition particle 54 kDa protein 2-like
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir03060  Protein export
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    120708214
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pvir02044]
    120708214
Enzymes [BR:pvir01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     120708214
Secretion system [BR:pvir02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   120708214
  Eukaryotic Sec-SRP protein
   120708214
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N cobW AAA_33 Fe-ADH AAA_19 AAA_17 ResIII nSTAND_NTPase7 MMR_HSR1 AAA_22 nSTAND3 nSTAND_NTPase5 Zeta_toxin CLP1_P APS_kinase DO-GTPase2 AAA_16 Methyltransf_24 wHTH-HSP90_Na-assoc
Other DBs
NCBI-GeneID: 120708214
NCBI-ProteinID: XP_039849278
LinkDB
Position
5K:50259135..50263158
AA seq 496 aa
MVLAQLGGSISRALAQMSNATVIDEKVLNDCLNEISRALLQADVQFKMVRDMQTNIKRIV
NLEALAAGTNKRRIMQQAVFTELCNMLDPGKPSFTPKKGKPSVVMFVGLQGSGKTTTCTK
YAYCHQRKGFKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFK
KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSA
SVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHIDEFEVFDVKPFVSRLLGMGDW
SGFMDKIHEVVPTDQQPELLQKLSEGSFTLRLMYEQFQNILKMGPIGQVFSMLPGFSAEL
MPKGHEKESQAKIKRYMTMMDSMTDAELDSTNPKLMTESRIIRIARGSGRPVRDVMDMLE
EYKRLAKIWGKMKGLKIPKKGEMSALSRNMNVQHMSKVLPPQMLKQIGGMGGLQSLMKQM
GSKEMSGMFGGMGGDR
NT seq 1491 nt   +upstreamnt  +downstreamnt
atggtgctcgcgcagctgggcgggagcatctcccgcgccctggcgcagatgagcaacgcc
acggtgatcgacgagaaggtgctcaacgactgcctcaacgagatctcgcgcgcgctcctc
caggccgacgtccagttcaagatggtccgcgacatgcagaccaacatcaagcgcatcgtc
aacctcgaggcgctcgccgccggcaccaacaagcgccgcatcatgcagcaggccgtcttc
acggagctctgcaacatgttggatcccgggaagccttccttcacacccaaaaagggaaag
ccaagcgttgtcatgttcgttggtctgcaaggttctggtaaaactaccacttgtacaaaa
tatgcatactgtcatcagaggaaaggattcaaaccagcactggtttgtgctgatacattt
agggctggtgcttttgatcagctaaaacaaaatgcaacgaaggccaagatccccttttat
ggaagctacatggagtctgatccagtgaaaattgctgttgagggtgtggagaggttcaag
aaagaaaattgcgatctcataattgtagatacaagtggaaggcacaaacaagaagctgca
ctttttgaggaaatgcggcaagtttcagaagcaactaaaccagacttggtaatatttgtg
atggacagcagtattggtcaggctgcatttgatcaggcacaggcatttaaacaaagtgct
tctgttggtgctgtgattattacgaaaatggatggtcatgcgaaaggaggtggcgctctt
agcgcggttgcagcaacaaaaagtcctgttatatttattggaactggagaacacattgat
gagtttgaagtttttgatgtgaagccatttgttagtcgcctgttaggtatgggagactgg
tcaggctttatggacaagattcatgaagtagtgcctaccgatcaacaacctgaacttctg
cagaaactgtctgaaggaagctttactctcaggcttatgtatgagcagttccagaacatt
ttgaaaatgggtcctattggccaggtcttctctatgttgcctggattcagtgctgaattg
atgccaaaagggcatgagaaggaaagccaggccaagattaagcggtacatgacgatgatg
gattccatgaccgatgcagagcttgacagcaccaacccgaagctaatgactgagtcacgg
attattcggattgcccgggggtctggccggcctgtcagagatgtcatggacatgctggaa
gagtacaagcggcttgctaaaatctggggcaagatgaaggggctcaagatcccaaagaaa
ggagagatgagtgcactgtcccgcaacatgaatgtccagcacatgagcaaggtcctcccg
ccgcagatgctgaagcagattggtggcatgggtggactgcagtcactgatgaaacagatg
ggatcaaaggagatgagtggaatgtttggaggcatgggtggtgaccggtaa

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