Panicum virgatum (switchgrass): 120708587
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Entry
120708587 CDS
T07260
Name
(RefSeq) ruvB-like protein 1
KO
K04499
RuvB-like protein 1 [EC:
5.6.2.4
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
120708587
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pvir03036
]
120708587
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pvir03037
]
120708587
Enzymes [BR:
pvir01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
120708587
Chromosome and associated proteins [BR:
pvir03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
120708587
Chromatin remodeling factors
SRCAP complex
120708587
INO80 complex
120708587
INO80 complex (yeast)
120708587
SWR1 complex
120708587
ASTRA complex
120708587
Cilium and associated proteins [BR:
pvir03037
]
Motile cilia and associated proteins
Dynein assembly factors
120708587
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TIP49
TIP49_C
AAA
RuvB_N
AAA_22
AAA_16
Cdc6_lid
AAA_25
bpMoxR
DnaB_C
Raco_middle
AAA_18
Motif
Other DBs
NCBI-GeneID:
120708587
NCBI-ProteinID:
XP_039849869
LinkDB
All DBs
Position
5K:53956990..53961720
Genome browser
AA seq
455 aa
AA seq
DB search
MRIEEVQSTSKKQRIATHTHIKGLGLDANGLALAMASGFVGQVGAREACGLIVDMIRQKK
MAGRALLLAGPPATGKTALALGVSQELGSKVPFCPMVGSEVYSTEVKKTEVLMENFRRAI
GLRIKENKEVYEGEVTELSPEEAESTTGGYAKSISHVIIGLKTVKGTKQLKLDPSIYDAL
IKEKVAVGDVIYIEANSGAVKRVGRCDSFATEYDLEAEEYVPIPKGEVHKKKEIVQDVTL
HDLDAANAQPQGGQDILSLMGQMMKPRKTEITDKLRQEINKVVNRYIDEGIAELVPGVLF
IDEVHMLDIECFSYLNRALESPLSPIVILATNRGICNVRGTDMTSPHGIPVDLLDRLVII
RTETYGPTEMIQILAIRAQVEEIDIDEESLAYLGEIGQQTSLRHAIQLLSPASVVAKTNG
REKIFKADLEEVSGLYLDAKSSARLLQEQQERYIT
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgaggatcgaggaggtgcagtcgacgtcgaagaagcagcgcatcgccacccacacccac
atcaagggcctcggcctcgacgccaatgggttggcgcttgcgatggcgtcggggttcgtg
gggcaggtgggggcgcgggaggcgtgcggcctgatagtcgacatgatacgccagaagaag
atggctggccgcgcgctgctccttgcgggcccgcccgccacgggaaagacggcgctcgcg
ctcggcgtctcccaggagctcggcagcaaggtccctttctgccctatggtaggatcggaa
gtgtactccacagaggtcaagaaaactgaggtgctgatggaaaattttcgtagagctata
ggtctgcgtataaaggaaaacaaagaggtttatgaaggagaggttactgaactttccccg
gaagaggctgagagtacaacaggtggatacgcaaaaagcattagccatgtaatcataggt
ctaaagactgttaaagggactaagcaactgaaattagatccttcaatttatgatgcttta
atcaaagaaaaggtggccgtgggtgatgttatatacattgaagcaaatagtggtgctgtg
aaaagagttggtagatgtgattcttttgctacagaatatgatcttgaagctgaggagtat
gttccaatccccaaaggcgaagtccataagaaaaaggaaatagtacaggatgtcacactt
catgacctggatgctgcaaatgctcagccacaaggaggtcaagatattttatcacttatg
ggccaaatgatgaagccgcggaagactgaaatcaccgacaaactacgccaagaaattaat
aaggtggtaaacagatatatcgatgaaggaattgcagagcttgtgcctggtgttttgttc
attgatgaggtccacatgttggacattgaatgcttttcttatctgaatcgtgcactggag
agcccattatcaccgattgtgatacttgctacgaataggggaatatgtaatgtgagaggt
actgatatgacaagtccacatggtataccagttgaccttctagataggctggtgattatt
cgaacagaaacatatggccctactgagatgatccagatactagctatccgagcacaagtg
gaagagattgatattgatgaagagagtcttgcttatttaggagagatcggacaacagact
tctttgagacatgctattcagctgctatcacctgccagtgtggttgcaaagactaatgga
agagagaagatcttcaaggctgatcttgaggaagttagcggactctatttggacgccaaa
tcgtctgctcgtctgctccaggagcaacaagaaagatacatcacttag
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