Panicum virgatum (switchgrass): 120708670
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Entry
120708670 CDS
T07260
Name
(RefSeq) transcription factor MYB1-like isoform X1
KO
K09422
transcription factor MYB, plant
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120708670
Transcription factors [BR:
pvir03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
120708670
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Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
SLIDE
Motif
Other DBs
NCBI-GeneID:
120708670
NCBI-ProteinID:
XP_039849979
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Position
5K:complement(54712309..54714317)
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AA seq
367 aa
AA seq
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MAVETQTLTEPPPQPQSHQASPPPSGEDDDVVVVSGASVGGDAAASAASAGNATTEERVR
GPWSPEEDAVLSDLVEKLGARNWTLIARGIPGRSGKSCRLRWCNQLDPQVKRKPFTEEED
RIIMVAHAVHGNKWACIAKLLDGRTDNAIKNHWNSTLRRRHCNDGRCKHGVSVERSVPEV
SRAVSEESWPLKDPSSFTAMDVRDAPVQTVTETSAGAWLIPVPDQCYSTQAVDPPYLSRP
VAKIGAFRPYNLGHVSEPTQQETPSSVFKPESTLKALTPESEVFKFADPTCFAAGVPNKC
GHGCSSAQKRTRKNSLLGPEFNEFEDHPPILSSSFASLVSEISSIAWMRSGMQSSDASSL
LQSAPPA
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atggcggtcgagacccaaaccctaacggagcctccgccccagccccaatcgcaccaagcc
tccccgcctccttccggggaggacgacgacgtggtggttgtctcgggtgcctccgtcggt
ggcgacgccgcggcgtccgcggcgtcggcgggcaacgcgaccacggaggagagggtgagg
gggccgtggtccccggaggaggatgcggtgctcagcgacctggtggagaagctcggggcg
cgcaactggactctgatcgcgcgcggaatccccggccgctccggcaagtcctgccgcctg
cgctggtgcaaccagctggacccccaagtcaagcgcaagcctttcactgaagaggaggac
cgtattataatggttgctcatgctgtccatgggaacaagtgggcatgtatcgcaaagctt
ttggatgggagaaccgacaatgctatcaagaatcactggaattccactctgaggcgtcga
cactgcaacgatggtcgatgcaaacatggtgtttctgtggagaggagtgtcccggaggtg
tccagggcagtttcagaagaatcttggcctttaaaagatcccagttcattcacagctatg
gatgtaagggacgctcctgtgcaaacagttacagaaacatctgctggggcatggctcatc
ccagtcccagatcagtgttatagtactcaagctgttgatcctccgtacctgtcccgacca
gttgcaaagattggtgctttcagaccatacaatctaggacatgtttcggaacctacccaa
caggaaacgccaagctctgtcttcaaacctgaatcaactcttaaagctttgactcctgaa
agtgaggtattcaagtttgctgatcctacatgctttgctgctggggttccaaacaaatgt
gggcatggttgcagcagtgcccaaaagcggactcgtaagaactccttgctgggtcctgag
ttcaatgagtttgaagatcatccgccaattttgagtagtagttttgcttcacttgtttca
gaaattagcagcattgcctggatgagaagcggtatgcaaagcagtgatgccagtagctta
ttgcagtcagctccaccagcctga
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