Panicum virgatum (switchgrass): 120708701
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Entry
120708701 CDS
T07260
Name
(RefSeq) uncharacterized protein LOC120708701 isoform X1
KO
K08596
sentrin-specific protease 7 [EC:
3.4.22.68
]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pvir01002
]
120708701
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvir04121
]
120708701
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.68 Ulp1 peptidase
120708701
Peptidases and inhibitors [BR:
pvir01002
]
Cysteine peptidases
Family C48: Ulp1 endopeptidase family
120708701
Ubiquitin system [BR:
pvir04121
]
Deubiquitinating enzyme (DUB)
UBL-specific proteases (ULPs)
120708701
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C48
ElaD-SseL-like_C
Motif
Other DBs
NCBI-GeneID:
120708701
NCBI-ProteinID:
XP_039850017
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All DBs
Position
5K:complement(55092714..55118035)
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AA seq
1304 aa
AA seq
DB search
MVKNIKDTMNVRQEHKAKPQPPKVNKLASGKQKVAGQQIGIQIPSVEDLLKESEVDKGGH
MHEMTFWKLSGSWNKSWDDRIMLSLGAVEQLLGKNKSSCFLEREFNGYDKQKIHTIFVPF
VMDEHWSLVVVEPDIEVIIVLDSYNELEDSTERHAQLINALKGHLCSSLGLQSANYSIIT
PVVQKQNNLDDCGFHMLLYIMQYKDQNYKNISEARKLQMNHAEVSGLLSVGMHETDVGGE
SYAVEYPKMDQDTSHETTKFDVVMATSALYTDNINTNACLDEHQMSGIQPMEEIKFGNAQ
PFELLSKGTAADSEEESMPSSPDTSSTGYMEQNLQHMYDALVDKVQPVVLSPAFITCDKT
LHLEPHLTFSFDGIKIEYLDLNSFEDKKMIALQWEISNIISISCKWAQNVGSALITLLAG
PKAETGNAGPVRVQFCLLDSQWPRRQQKIWELGPRYQEIWKEIPSDEFTSEDWSIEPSLF
FPRQYFSSTDDFEDIIYPQGDPDAVSISKRDVELLLPETFVNDTIIDFYIKYLTTRIEST
EKRRFHFFNSFFFRKLADLDKDQGRAPEGRAAFLRVRKWTRKINVFEKDFLFIPVNFNLH
WSLIVICYPGEVATFKDGDTKLSAKVPCILHMDSLKGSHTGLKDIIQSYLWEEWKERHPE
SASDNSDKFLNLRFVSLELPQQDNSFDCGLFLLHYVELFLMDAPRNFNPLKIDVFSGFLS
GDWFAPAEASLKRSVVRKLIHEVLTGSFQNHPKLACSGEQLDERHQRCSNAEQESANEFL
AQRCTAGDPETVCTVHDGTHEIQPSKSICLNDSEEKGLPVSGCLLDTGKVSIVDAQNLQV
YAPDMENVCLSSQAEKNEPVIAESNNQLNMRSCAPGQDEVLKGSNCVVTDKEHGESLFAS
LDDNQEVSSRTEVEMQDIMVSTSCSISEITAQVIACQEHSFQRSADIGDECFRPSQDVAS
VMTLDSITVDDGPNSERNAAEGDRGDHHEYTDSVTVGDDKDVADTKCEDNLVDPIIGESA
IIENVKENNTTDPVTVENAIIENVKDISTTADDVNHGELYVSSQLPEGNIDSGVTVSGSE
SKFGSPDNGMAGASTVPSDLKEQTIEKVVAGDFTHESNINAKNRSELEVGNTGYSMTGVN
TVSSVMNEGNTDRIISGGCTNATDVNADGEGSGNYKYSAMDSAVPCEDETTCTDGVIPSM
DVPCRTMNETVLEDKPSDAKRPLPDGPCELVDRPCMPKNETSENTSLDGKRSAPDGTCEE
NPGDKCIQNDDGQSTDAKIERHYKRRKVRALEKQQSFSGASSLD
NT seq
3915 nt
NT seq
+upstream
nt +downstream
nt
atggtaaagaatattaaggatacaatgaatgtcagacaagagcacaaggccaagcctcaa
ccccccaaagtaaataaactagcttccggaaagcaaaaggttgcaggacaacagataggg
attcaaattccatctgtggaagatttgctcaaggaaagtgaggttgataagggtggtcac
atgcacgagatgacgttttggaagctctcaggctcatggaacaaatcatgggatgaccgg
attatgctttcacttggtgctgtagaacaattgttagggaagaataaaagttcttgtttt
ctcgaaagagaatttaacggttatgacaaacagaaaatacatacgatttttgtccctttc
gttatggatgaacactggtccttagttgtggtggaacctgatatagaagttataattgtt
cttgattcctataatgaattggaggactccacagaacgtcatgcacaactgataaatgca
ctgaaaggtcatctttgttcttcactaggcctgcaatctgctaactacagcattattaca
ccagtagttcagaagcaaaacaaccttgatgattgtggttttcatatgcttctgtacata
atgcaatataaggatcaaaactacaagaacattagtgaggccagaaagttacagatgaat
catgctgaagtctctggtttgttaagtgttggtatgcatgaaacagatgtgggtggagaa
tcatatgcagttgaatatcctaaaatggatcaggatacttcccatgaaacaaccaaattt
gatgtagtaatggcaacttcggcattgtatactgataatatcaataccaatgcttgcttg
gatgaacatcaaatgtcaggaattcagcctatggaggaaattaaatttggcaatgcacaa
ccctttgagcttctatcgaaaggaacggcagctgattctgaggaagaaagcatgccatct
agccctgacacttcgtctaccggttacatggagcaaaatctgcaacatatgtatgatgcg
ctggttgacaaagtacaaccagttgtgcttagtcctgcctttataacatgtgacaaaact
ttgcaccttgagcctcaccttactttctcattcgatgggatcaaaattgagtatttggat
ttaaattcctttgaagacaagaagatgatagctttacaatgggaaatctcaaatattatt
tccatcagttgtaaatgggctcagaatgttggatctgccttgataacactccttgctgga
cccaaagcagaaactggaaatgcaggtcctgttagagtacaattttgtcttcttgattca
caatggccaaggagacaacagaagatctgggaactcggaccaagatatcaagaaatatgg
aaggaaatcccatcagatgagtttacatcggaggattggagcattgaacccagtctgttt
tttcctaggcaatacttttcaagcactgacgactttgaagatataatctatccccaagga
gatcctgatgctgtttccattagcaaaagggatgttgagctccttcttcctgaaactttt
gtcaatgatacaataattgacttttatatcaaatacttgaccacaagaattgaatctacc
gagaagcgcaggttccacttctttaatagcttcttttttcgcaagctggcagatcttgac
aaagatcaggggagagctccagaaggtagagcagccttcttacgtgttcgcaaatggacc
cgcaaaataaatgtatttgagaaggattttctgttcattccagtcaacttcaacttgcac
tggagcttaattgttatttgctatcctggagaagtggcgacatttaaagatggagatacg
aagctctcagctaaagttccatgtattttacacatggattcacttaaaggaagtcatact
ggactcaaggacatcattcaaagttatttatgggaagagtggaaagaaaggcaccctgaa
tcagcatcagataattcggacaaattcttgaacttgagatttgtttcccttgagctccct
caacaggataattcatttgattgcggcttgttcttgctccattatgtggaattatttttg
atggatgctccaaggaacttcaatccactgaagattgatgtattttctggctttcttagt
ggtgattggtttgcacctgctgaagcttctctcaagcgatcggttgtccgaaagttaatt
catgaggtgctgacaggatcgtttcagaatcaccctaagctagcttgcagtggcgagcag
cttgatgaaagacatcaaagatgctcaaatgctgagcaggaatcagctaatgaatttctt
gctcagaggtgcactgctggtgaccctgaaacagtttgcacagttcatgatggcactcat
gaaatacagccatccaagtccatctgtttaaatgattccgaagaaaaggggttgcctgtt
tctgggtgcttgttggacactggaaaggtttcaattgtcgatgcacagaatctacaggtt
tatgcaccagacatggaaaatgtttgcctgtcaagccaagctgagaaaaatgagccagtt
attgcagaatctaacaatcaacttaatatgagatcatgtgccccaggacaagatgaagtg
ctcaagggatcaaattgtgtggtaacagataaggaacatggagaatctttgtttgcttct
ttggatgataaccaagaagtttccagtagaacagaagttgagatgcaggacattatggtt
tccacgagctgctcaatttctgaaattactgctcaggtaattgcctgtcaagaacattct
ttccaaagaagtgcagacattggggatgagtgctttagaccttctcaagatgtggcttct
gtcatgactctcgactccatcacagttgatgatggaccaaattcagaaagaaatgcagct
gaaggtgatcgtggtgaccatcatgaatatacggattcagtcacagtcggcgacgacaaa
gatgttgctgatacgaagtgtgaagataatcttgtggatcctataataggagaaagtgct
atcatcgagaatgtgaaggaaaacaacacaactgatcctgtaacagtagaaaatgccatc
atcgaaaatgtgaaggatattagcacaactgccgacgatgtcaatcatggtgagctgtat
gtttcatctcagttgccagaaggaaacattgacagtggtgtgactgttagtggttctgag
tcgaaattcggaagccccgataatggtatggctggtgctagcacagttccctctgacttg
aaagagcaaactattgaaaaagtagtggcaggcgactttacacatgaaagtaacataaat
gccaagaataggtccgagttggaagtgggaaatactggatatagtatgactggtgttaat
acagtttcctctgtcatgaatgagggaaacactgaccgaataatatcaggtggttgtaca
aatgcaactgatgtaaatgctgatggtgagggttctggcaattacaaatactcagcaatg
gacagtgcagttccttgtgaagatgagacaacctgcactgatggtgtgattccatccatg
gacgtgccctgcaggactatgaatgaaacagttttggaggacaaaccttccgatgctaaa
aggcctctgcccgatggcccctgtgaacttgttgatagaccttgcatgccgaagaatgaa
acgtcagagaacacatctcttgatggtaagaggtctgcacctgatggcacctgcgaagag
aatcctggtgacaagtgtatacagaatgatgatggtcagagcactgatgcaaaaatagag
aggcattacaagcgacggaaggttcgggccttagagaaacagcaaagcttctcgggtgcc
tcatcgttagattag
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