Panicum virgatum (switchgrass): 120708715
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Entry
120708715 CDS
T07260
Name
(RefSeq) auxin transporter-like protein 1
KO
K13946
auxin influx carrier (AUX1 LAX family)
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
120708715
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GFIT
Motif
Pfam:
Aa_trans
Motif
Other DBs
NCBI-GeneID:
120708715
NCBI-ProteinID:
XP_039850037
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Position
5K:55383397..55389750
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AA seq
487 aa
AA seq
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MAREQLEEAIVADGNGKEEEVGVMGIAGAGDGDEQHGGGKFSMKSFLWHGGSVWDAWFSC
ASNQVAQVLLTLPYSFSQLGMLSGVLLQIFYGFLGSWTAYLISVLYVEYRSRKEKEGVSF
KNHVIQWFEVLDGLLGPYWKAAGLAFNCTFLLFGSVIQLIACASNIYYINDRLDKRTWTY
IFGACCATTVFIPSFHNYRIWSFLGLGMTTYTAWYLAIAALINGQVEGVSHTGPTKLVLY
FTGATNILYTFGGHAVTVEIMHAMWKPAKFKYIYLLATLYVFTLTLPSASAMYWAFGDEL
LSHSNAFSLLPKNGWRDAAVILMLIHQFITFGFACTPLYFVWEKMIGMHDAKSIFKRALA
RLPIVVPIWFLAIIFPFFGPINSAVGALLVSFTVYIIPALAHILTYRTASARMNAAEKPP
FFLPSWAGMFVVNVFIVVWVLVVGFGLGGWASMVNFIRQIDTFGLFAKCYQCPKPPVPAA
PAPLPHH
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgcgagcagctggaggaggccatcgtggccgacggcaacggcaaggaggaggag
gtcggcgtcatgggcatcgccggcgcgggcgacggcgacgagcagcacggcggcggcaag
ttcagcatgaagagcttcctctggcacggcggctccgtctgggacgcgtggttcagctgc
gcctccaaccaggtggcgcaggtgctgctgaccctgccgtactccttctcgcagctgggg
atgctgtccggcgtgctgctgcagatcttctacggcttcctgggcagctggacggcctac
ctcatcagtgtcctctacgttgagtaccgctcccgcaaggagaaggagggcgtcagcttc
aagaaccacgtcatccagtggttcgaagtgctggacgggctgctgggcccgtactggaag
gcggccggcctggccttcaactgcacgttcctgctcttcggttccgtcatccagctgatc
gcctgcgccagcaacatctactacatcaacgaccggctggacaagcggacatggacgtac
atcttcggcgcctgctgcgccaccacggtgttcatcccctccttccacaactaccggatc
tggtccttcctggggctcggcatgaccacctacaccgcgtggtacctcgccatcgccgcg
ctcatcaacggccaggtagagggcgtctcgcacaccggcccgaccaagctcgtgctctac
ttcaccggcgccaccaacatcctctacaccttcggcggccacgccgtcacagtcgagatc
atgcacgcgatgtggaagcctgccaagttcaagtacatctacctgctggcgacgctgtat
gtgttcacgctgacgctgccgtcggcgtcggccatgtactgggcgttcggcgacgagctc
ctgagccactcgaacgccttctcgctgctgcccaagaacgggtggcgcgacgcggcggtg
atcctgatgctgatccaccagttcatcacgttcgggttcgcgtgcacgccgctctacttc
gtgtgggagaagatgatcgggatgcacgacgccaagagcatcttcaagcgcgcgctggcg
cggctccccatcgtggtgcccatctggttcctcgccatcatcttccccttcttcggcccc
atcaactccgccgtcggcgccctcctcgtcagcttcaccgtctacatcatccccgcgctc
gcccacatcctcacctaccgcacggcctccgcgcgcatgaatgctgcggagaagccaccg
ttcttcctgccgagctgggcggggatgttcgtggtgaacgtgttcatcgtggtgtgggtg
ctggtggtcggcttcgggctcggcggctgggccagcatggtgaacttcatcaggcagatc
gacacgttcgggctcttcgccaagtgctaccagtgccccaagccgcccgtccccgccgcg
ccggcgccgttgccgcaccactag
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