Panicum virgatum (switchgrass): 120708738
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Entry
120708738 CDS
T07260
Name
(RefSeq) bZIP transcription factor ABI5 homolog
KO
K14432
ABA responsive element binding factor
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
120708738
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120708738
Transcription factors [BR:
pvir03000
]
Eukaryotic type
Basic leucine zipper (bZIP)
Plant bZIP factors
120708738
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
bZIP_1
bZIP_2
bZIP_Maf
POP1_C
Motif
Other DBs
NCBI-GeneID:
120708738
NCBI-ProteinID:
XP_039850072
LinkDB
All DBs
Position
5K:55544266..55548902
Genome browser
AA seq
408 aa
AA seq
DB search
MASEMSKNVKVLDEQEVTSHQRGDQGVRARPGGAAAEGQEDQLARQPSIMSLTLEELQSS
LCEPGRNFGSMNMDEFVANIWNAEEFQAATGGYKDDAPEQEQEATAAAATGVGGGNGGSG
LVRQGSFALPPPLSRKTVEEVWAEINQGAPADAGAHPAPQAIVQPQVGSGGVAASGRQVT
LGEMTLEDFLVRAGVVRGAFAAGHGQGQAVGMVPAAPMVHMQQGQLAAPMMYQVAPGNAV
FPVMGDGMGYHNGYPGAAMAVVPPPPPSQCVAPAVSPGSSDGMSAMTQAEMMSCIGNGGM
VRNGGGARKRDSPEDGCTEKTVERRQRRMIKNRESAARSRARKQAYTVELEAELNHLKEE
NARLKAEENTILLSKKKMLVEKMMEQARENVSAKKSGRGLRRCGSAMW
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcagagatgagcaagaacgtcaaggtccttgacgagcaggaggtcacctcgcac
cagcgcggcgaccagggcgtccgcgcccggcccggcggcgcggcggcggagggccaggag
gatcagctggcgcggcagccgtcgatcatgtcgctgacgctggaggagctccagagctcg
ctctgcgagccgggacgcaacttcgggtccatgaacatggacgagttcgtggccaacata
tggaacgccgaggagttccaggccgccaccggcgggtacaaggacgacgcgccggagcag
gagcaggaggcgacggcggcagcggcgacaggggtaggtggtgggaacggggggagcggg
ttggttcggcaggggtcgttcgctctgccgccgccactgtcgcggaagacggtggaggag
gtctgggcggagatcaaccagggggccccggcggacgcgggggcccacccggcgccgcag
gccatcgtgcagccgcaggtggggagcggcggcgtcgcggccagcgggcggcaggtgacg
ctgggcgagatgacgctggaggacttcctggtcagggccggcgtcgtccggggcgccttc
gccgccgggcacggccagggccaggcggtcggcatggtcccggccgcgccgatggtccac
atgcagcaggggcagctcgcggctcccatgatgtaccaggtggcgccggggaacgccgtg
ttcccggtgatgggagacggcatggggtaccacaacgggtaccccggggcggccatggcg
gtggtgccgcctccgccgccgtcccagtgcgtggcgcccgccgtgagcccggggtcgtcg
gacgggatgagcgccatgacgcaggcggagatgatgagctgcattggcaacggagggatg
gtccggaacggcggcggcgcgaggaagcgcgactcccccgaggacgggtgcaccgagaag
acggtggagcgccggcagcggcgcatgatcaagaaccgcgagtcagcggcccggtcacga
gccaggaagcaggcgtataccgtggagctcgaggccgaattgaaccatctcaaggaggag
aatgcgcgcctcaaagccgaggagaatacaattctgctgtcgaagaaaaagatgctggtg
gagaagatgatggagcaggcgagggagaacgtcagcgccaagaagagcggtcgcgggctg
cgccgctgcggcagcgccatgtggtga
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