Panicum virgatum (switchgrass): 120708745
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Entry
120708745 CDS
T07260
Name
(RefSeq) acidic endochitinase SE2-like
KO
K01183
chitinase [EC:
3.2.1.14
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00520
Amino sugar and nucleotide sugar metabolism
pvir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
120708745
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.14 chitinase
120708745
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_18
Motif
Other DBs
NCBI-GeneID:
120708745
NCBI-ProteinID:
XP_039850078
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Position
5K:55573806..55574927
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AA seq
298 aa
AA seq
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MASRALTPFQLMGILLVAFLATCHAGGIAVYWGQNDGEASLSDTCESGNYKFVILAFVYK
FGKGQTPQLDLASHCDPSSGGCTGLSEDIRSCQRSGVKVLLSIGGGDGSYGLTSEGDARD
VAAYLWNNYLGGTSSSRPLGDAVLDGIDFDIELGGAKYWDSLARDLKNMGKNQGGKGVLL
SAAPQCPFPDEWDSNAISTGLFDFVWVQFYNNPPCQVSAGRGAFMDAWKQWESVPAGQIF
LGLPASKDAAGTGFVPAGDLNSNVLPLIRGSPKYGGVMLWSKYYDDRTGYSSAIKSQV
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atggcaagccgagctctgactcccttccagctcatgggcatcctcttggtggcgttcctt
gccacatgccacgccggcggcatcgccgtctactggggccagaacgacggcgaggcgtcc
ctgtccgacacgtgcgagtccggcaactacaagttcgtcatcctcgcgttcgtgtacaag
ttcggcaaggggcagacgccacagctcgaccttgccagccactgcgacccctcgtcgggc
ggctgcacggggctgagcgaggacatccgttcgtgccagcgcagcggcgtcaaggtcctg
ctctccatcggcggcggcgacggcagctacggcctgacctccgagggcgacgcgcgcgac
gtggccgcgtacctctggaacaactacctcggcggcacgtcgtcgtcccggcccctcggc
gacgccgtccttgacggcatcgacttcgacatcgagctcggcggcgccaagtactgggac
agcctcgccagggacctgaagaacatgggcaagaaccagggcggcaagggggtgctgctg
agcgcggcgccgcagtgcccgttcccggacgagtgggacagcaacgcgatcagcacgggg
ctcttcgacttcgtgtgggtgcagttctacaacaacccgccgtgccaggtgagcgcgggc
cgcggcgcgttcatggacgcgtggaagcagtgggagtcggtgccggcggggcagatcttc
ctgggcctgcccgcctccaaggacgccgcgggcaccgggttcgtgcccgccggcgatctc
aactccaacgtgctgccgctcatcaggggctcgcccaagtacggcggcgtcatgctctgg
tccaagtactacgatgatcgcacgggctacagctccgccatcaagagccaagtgtga
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