Panicum virgatum (switchgrass): 120708782
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Entry
120708782 CDS
T07260
Name
(RefSeq) VAMP-like protein YKT61
KO
K08516
synaptobrevin homolog YKT6
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
120708782
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120708782
Membrane trafficking [BR:
pvir04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Ykt6
120708782
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Motif
Pfam:
Longin
Synaptobrevin
AcrIIA4
Motif
Other DBs
NCBI-GeneID:
120708782
NCBI-ProteinID:
XP_039850125
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Position
5K:55945249..55948896
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AA seq
210 aa
AA seq
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MKITALLVLKPSTSGAGSSSSGGGSGPEAVVLANATDVSHFGYFQRGAAREFIVFVARTV
AQRTQPGQRQSVQHEEYKVHSHNRNGLCAVAFMDDHYPVRSAFSLLNKVLDEYQKDFGDS
WKSATADGTQQWPFLTDALTKFQDPAEADKLMKIQRDLDETKIILHKTIESVLARGERLD
SLVEKSSDLSAASQMFYKQAKKTNQCCTIL
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
atgaagattaccgcgcttctggtgctgaagccgtcgacctccggcgccgggagctcctcg
tcaggcggcgggtcgggcccggaggcggtggtgctcgcgaacgcgacggacgtgagccac
ttcggctacttccagcgcggcgccgcccgcgagttcatcgtcttcgtcgcccgaaccgtc
gcgcagcgcacccagcctggccagcgtcagtccgtccagcacgaagaatataaggtccat
tcacacaacagaaatggtctttgtgcggtggcattcatggacgatcactatcctgtacgg
agtgcattttctcttctgaataaggttcttgatgagtaccagaaggattttggggactcc
tggaaatctgctactgcagatggaactcaacagtggcctttcctcacggatgctttgaca
aaatttcaggaccctgcagaagctgacaaattaatgaaaatccagagggacttggatgaa
acaaaaatcatcctacataaaactattgagagtgtccttgccaggggagagagactggat
agcttggttgagaaaagctctgacctgagcgctgcttcacagatgttctacaagcaggca
aagaagacaaaccagtgttgcactatactttga
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