KEGG   Panicum virgatum (switchgrass): 120708782
Entry
120708782         CDS       T07260                                 
Name
(RefSeq) VAMP-like protein YKT61
  KO
K08516  synaptobrevin homolog YKT6
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir04130  SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04130 SNARE interactions in vesicular transport
    120708782
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pvir04131]
    120708782
Membrane trafficking [BR:pvir04131]
 SNARE
  VAMP, Ykt6, Sec22 (R)
   Ykt6
    120708782
SSDB
Motif
Pfam: Longin Synaptobrevin AcrIIA4
Other DBs
NCBI-GeneID: 120708782
NCBI-ProteinID: XP_039850125
LinkDB
Position
5K:55945249..55948896
AA seq 210 aa
MKITALLVLKPSTSGAGSSSSGGGSGPEAVVLANATDVSHFGYFQRGAAREFIVFVARTV
AQRTQPGQRQSVQHEEYKVHSHNRNGLCAVAFMDDHYPVRSAFSLLNKVLDEYQKDFGDS
WKSATADGTQQWPFLTDALTKFQDPAEADKLMKIQRDLDETKIILHKTIESVLARGERLD
SLVEKSSDLSAASQMFYKQAKKTNQCCTIL
NT seq 633 nt   +upstreamnt  +downstreamnt
atgaagattaccgcgcttctggtgctgaagccgtcgacctccggcgccgggagctcctcg
tcaggcggcgggtcgggcccggaggcggtggtgctcgcgaacgcgacggacgtgagccac
ttcggctacttccagcgcggcgccgcccgcgagttcatcgtcttcgtcgcccgaaccgtc
gcgcagcgcacccagcctggccagcgtcagtccgtccagcacgaagaatataaggtccat
tcacacaacagaaatggtctttgtgcggtggcattcatggacgatcactatcctgtacgg
agtgcattttctcttctgaataaggttcttgatgagtaccagaaggattttggggactcc
tggaaatctgctactgcagatggaactcaacagtggcctttcctcacggatgctttgaca
aaatttcaggaccctgcagaagctgacaaattaatgaaaatccagagggacttggatgaa
acaaaaatcatcctacataaaactattgagagtgtccttgccaggggagagagactggat
agcttggttgagaaaagctctgacctgagcgctgcttcacagatgttctacaagcaggca
aagaagacaaaccagtgttgcactatactttga

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