Panicum virgatum (switchgrass): 120708786
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Entry
120708786 CDS
T07260
Name
(RefSeq) protein YIP4a-like
KO
K22943
protein YIPF6
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120708786
Membrane trafficking [BR:
pvir04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
YIPF proteins
120708786
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Yip1
DUF6611
Motif
Other DBs
NCBI-GeneID:
120708786
NCBI-ProteinID:
XP_039850130
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Position
5K:56012083..56014593
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AA seq
275 aa
AA seq
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MSHNHGDTIPLHPSSAQSDMDEIESLIHAAPSSATVLPARPPSPPRASIPVSSSPAPAPV
LSKPPLPAASIPISVSPVPPASSSVSVPIGSDGFGPPPNTLTEPVWDTVKRDLARIVSNL
KLVVFPNPYREDPGKALRDWDLWGPFFFIVFLGLTLSWSASVKKSEVFAVAFAVLAAGAI
ILTLNVLLLGGHIIFFQSLSLLGYCLFPLDVGALVCMLKDNVILKIVVVAITLAWSSWAA
YPFMSAAVNPRRKALALYPVFLMYISVGFLIIAID
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcacaaccacggcgacacgatcccgctccacccgtcgtcggcgcagtccgacatg
gacgagatcgagagcctgatccacgccgcgccctcctcggccacggtactccccgcgcgg
ccgccctccccgccgcgcgcctccatcccggtctcctcctccccggccccggcgcccgtc
ctttcgaagcccccgctccccgctgcctccatcccgatctccgtctcccccgtgccgccc
gcgtcctcctccgtttccgtccccatcggctccgacggcttcgggcccccgcccaacacg
ctcaccgagcccgtatgggacaccgtcaagcgagacctcgcccgcatcgtcagcaacctc
aagctcgtcgtcttcccgaacccctaccgcgaggaccccggcaaggcgctcagggactgg
gacctgtgggggcccttcttcttcatcgtcttcctcggtctcaccctctcctggtcggcc
tccgttaagaagtctgaagtatttgccgtggcatttgctgtcctggctgctggggcgata
attctaactttaaatgttctgcttctgggtggacacatcatcttcttccaaagcctcagt
cttcttggctattgcctgtttccactggatgtcggtgctctagtctgcatgctgaaggac
aatgtcatacttaagattgtcgtggtggcaatcacattggcatggagctcatgggctgcg
tatccattcatgagtgctgcagtcaacccaaggagaaaggctttggccctatatcctgtc
ttcctcatgtatatctcagttggtttcctcataattgccatagattaa
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