KEGG   Panicum virgatum (switchgrass): 120708830
Entry
120708830         CDS       T07260                                 
Name
(RefSeq) serine hydroxymethyltransferase 7-like
  KO
K00600  glycine hydroxymethyltransferase [EC:2.1.2.1]
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir00260  Glycine, serine and threonine metabolism
pvir00460  Cyanoamino acid metabolism
pvir00630  Glyoxylate and dicarboxylate metabolism
pvir00670  One carbon pool by folate
pvir01100  Metabolic pathways
pvir01110  Biosynthesis of secondary metabolites
pvir01200  Carbon metabolism
pvir01230  Biosynthesis of amino acids
pvir01240  Biosynthesis of cofactors
pvir04981  Folate transport and metabolism
Module
pvir_M00532  Photorespiration
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    120708830
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    120708830
  09106 Metabolism of other amino acids
   00460 Cyanoamino acid metabolism
    120708830
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    120708830
 09150 Organismal Systems
  09154 Digestive system
   04981 Folate transport and metabolism
    120708830
Enzymes [BR:pvir01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.2  Hydroxymethyl-, formyl- and related transferases
    2.1.2.1  glycine hydroxymethyltransferase
     120708830
SSDB
Motif
Pfam: SHMT Beta_elim_lyase
Other DBs
NCBI-GeneID: 120708830
NCBI-ProteinID: XP_039850184
LinkDB
Position
5K:56521135..56525489
AA seq 592 aa
MDLSRPASSDLSLGLHSHGPSHAHARVHAVAAPLRLFDDSEDAKPERLEGGEAGGEREDD
DDDGGDQHFSLLGHSLCVKRPRRAVNGGGGGGGETSSCSSSSAALRPAKRQATGEGCRPD
LETRRTAVRAWGNQSLAEADPDVHALMERELDRQVRGIELIASENFVCRAVLDALGSHLT
NKYSEGLPGARYYGGNQHIDAIERLCHERALAAFGLDPACWGVNVQPYSCTSANLGVYTG
LLQPKDRIMGLEPPSGGHVSHGYYTPGGKKVSGASIFFESLSYKVNPQTGYIDYDKVEER
AMDFHPKILICGGSSYPREWDFTRMRLIADKCGAVLMCDMAHISGLVAAKECRSPFDYCD
VVTSTTHKNLRGPRGGIIFFRKGKKLRKRGGSFSQGDEGEYDFEDKINFGVFPSMQGGPH
NNHIAALAITLKQVATPEYKAYIQQVKKNAQALASALLRRKCRLVTGGTDNHLVLWDLRT
LGLTGKIFEKVCEACHISINKTPIYGDNGSISPGGVRIGTPAMTTRGCLEDDFELIAEFL
IRATQIASNVLKEHGKLQKEFLRGLQNNKDVVELRNQVEAFASQFAMPGFDV
NT seq 1779 nt   +upstreamnt  +downstreamnt
atggatctctcgcggcccgcgtcgtcggacctctcgctcgggctccattcccacggcccc
tcccacgcccacgcccgcgtgcacgcggtcgccgcgccgctgcggctgttcgacgactcg
gaggacgccaagccggagcgtctcgagggcggggaagcaggcggggagagggaggacgac
gacgacgacgggggagaccagcacttctcgctcctcggccactcgctctgcgtcaagcgc
ccgcgccgcgcggtcaacggcggtgggggcgggggaggagagacctcctcctgctcgtcc
tcgtccgcggcgctgcgccccgcgaagcggcaggcgacgggggagggctgccgcccggat
ctggagacccgccgcaccgcggtccgcgcctggggcaaccagtcgctggcggaggccgac
ccggatgtgcacgcgctgatggagcgcgagctcgaccgccaggtgcggggcatcgagctc
atcgcgtcggagaacttcgtctgccgagcggtgctcgacgcgctcggcagccacctcacc
aacaagtactccgaggggcttccgggtgctcgctattacggcgggaaccagcacatcgat
gccatcgagcggctctgccacgagcgcgccctcgctgccttcggtctcgaccccgcctgc
tggggcgtcaatgtccagccttactcgtgcacgtccgccaatttgggtgtctacacgggg
ctacttcaacccaaggatcgcatcatggggctggagccaccgtcaggcggccatgttagc
cacggttactacactcctggtgggaagaaggtgtcaggcgcctctattttcttcgagagc
ttgtcgtacaaggtgaacccacaaactgggtatattgattatgacaaggttgaggagcgg
gcaatggatttccatcccaaaattctcatctgtggtgggagctcgtaccccagagagtgg
gacttcacacggatgaggttgattgctgataagtgtggtgcggtgcttatgtgcgacatg
gcgcatatcagtggtcttgttgcagcaaaggaatgccgtagccccttcgactactgtgat
gttgttacgtcaactactcataagaaccttaggggtcctagaggtggtataatattcttc
aggaaagggaaaaaattaaggaaacgaggtggatctttttctcaaggggacgagggtgaa
tacgactttgaggataagataaattttggtgttttcccttcaatgcaaggagggccccat
aataatcatattgctgccttggcaataaccctgaagcaggtagcaactcctgagtataaa
gcatacattcaacaagtcaagaaaaatgcccaggctttggcatcagccttgctcagaaga
aaatgcagattggttactggtggcacagataatcacttagtgctttgggatctcagaact
cttggcttgacgggcaagatcttcgaaaaggtctgtgaggcatgccacatatctatcaac
aagacaccaatttacggggataatggctcgatatcaccaggaggtgttcgaatcggaaca
cctgcaatgactactagaggttgcttagaggatgatttcgagttgattgcagagttcctc
atcagggcgactcagattgctagtaatgttctgaaagaacatgggaaactacaaaaggag
tttctacgaggactacagaacaataaggatgttgtagaactccgcaatcaggttgaggca
tttgcatcacagtttgcgatgccaggttttgatgtatga

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