Panicum virgatum (switchgrass): 120708888
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Entry
120708888 CDS
T07260
Name
(RefSeq) MADS-box transcription factor 2
KO
K09264
MADS-box transcription factor, plant
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120708888
Transcription factors [BR:
pvir03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box regulators of differentiation, Homeotic genes
120708888
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SRF-TF
K-box
HALZ
Csm1_B
CreA
Motif
Other DBs
NCBI-GeneID:
120708888
NCBI-ProteinID:
XP_039850247
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Position
5K:complement(57019353..57022545)
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AA seq
209 aa
AA seq
DB search
MGRGKIEIKRIENSTNRQVTFSKRRNGILKKAREISVLCDAEVGVVIFSSAGKLYDFCSP
KTSLSKILEKYQTNSGKILWDEKHKSLSAEIDRIKKENDTMQIELRHLKGEDLNSLQPKE
LIMIEEALDNGLTNLNEKLMEHWELHVRNNKMLEDENKLLAFKLHQQDIALSGSMRDLEL
GYHPDQDFAAQMPITFRVQPSHPNLQENN
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atggggcgcggcaagatcgagatcaagcggatcgagaactccaccaatcgccaggtaacc
ttctccaagcgccgtaacgggatcctcaagaaggcgcgggagatcagcgtgctctgcgac
gccgaggtcggcgtcgtcatcttctccagcgccggcaagctctacgacttctgctccccc
aagacatcgctatcaaaaatcttggagaagtaccaaaccaattctggaaagatactatgg
gatgagaaacacaagagccttagtgctgagattgatcgtataaagaaagagaacgatacc
atgcagattgagctcaggcacctgaaaggtgaggatctgaactcgctgcaacccaaagag
ctgatcatgattgaggaggcacttgataatgggctgacaaatctgaatgagaaacttatg
gagcactgggaattgcatgtgagaaacaataagatgctggaagatgagaacaagctgctg
gccttcaagttgcaccagcaagatattgcgctgagcggcagcatgagagatcttgagctg
gggtaccatcctgaccaggactttgcggcccagatgccaatcacattccgcgtgcagccc
agccatcccaacttgcaggagaacaattaa
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