Panicum virgatum (switchgrass): 120708956
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Entry
120708956 CDS
T07260
Name
(RefSeq) probable thimet oligopeptidase
KO
K01392
thimet oligopeptidase [EC:
3.4.24.15
]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pvir01002
]
120708956
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.15 thimet oligopeptidase
120708956
Peptidases and inhibitors [BR:
pvir01002
]
Metallo peptidases
Family M3
120708956
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Gene cluster
GFIT
Motif
Pfam:
Peptidase_M3
Motif
Other DBs
NCBI-GeneID:
120708956
NCBI-ProteinID:
XP_039850354
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Position
5K:58095335..58102008
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AA seq
695 aa
AA seq
DB search
MEPRRRERQVIAVAGAAALVAVGLNIAFSAVAAHRRRKRQELPGFTAQVNLSPAEIKKLA
DRIIAKAKETYDSVAAVPLDKVSFANVVAPLAELDALQFPLVQACVLPRMVSTSEDVRKA
SAEAEKRLDSHFVLCRQREDVYRVIKAFAVKGERIGPEATRFLQCLVKEFERNGVKLSQS
KGKEMEKLKCHIDELNLKYLQNLNDFTKFLLLSEDELAGMPFEFLKDLEKAEGKLKVPLT
SYHVTPILEHCKVGSTRKQVAVAYGQKGGKDNLAILENLVQLRHKFARLLGYANYADFAI
EPRMPRTSRKVLEFLEEISEQLSDVANRELSILKDLKMKEEGNAHVGMEDLLYYIKRAEE
FKVDLDIGEIKQYFPVSLVISGMLKMFQDLFALRFDETKDAEVWHDTVRVFSVWDASSSD
LLGYFFLDIFAREGKYCHTCVVTLQNGCLCSNGTRKVPAAVLLSQCPKEFDGNSALLRFP
EVVRLFHEFSHVVHHISNRVTFSKFSALRLEGDFAEIPSLLLENWCYESISLKMMSGFHQ
DITKSITSEACQSLKRRRDLFAGLKMKQEILLCLVDQIIHSSENVDIDNLIKELHPKVML
GIPLLEGTSPASCFPRIAIGDDAVCYSYIWSEVFAADLFVSKFKDDLLNQHAGLRFRNKV
LAPGGSKDSLEIITDYLGREPSLQSFIQSRTRNSL
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atggagcccaggaggcgggagcgccaggtcatcgccgtcgcaggcgcggcggcgctcgtt
gccgtcggcctcaacatcgccttctccgccgtagccgcccaccgccggaggaagcgacaa
gagcttccagggtttactgctcaagtcaacttgtcaccagctgagattaaaaagttagct
gaccgtatcatcgctaaggcgaaggaaacatatgattcagtggctgcagtgcccctagat
aaagtcagttttgcaaatgttgttgcaccactggcagagttagatgcgctgcaatttcct
ctggttcaagcttgtgttctcccaaggatggtatcaacatctgaggatgttcggaaagcc
agtgctgaagctgagaaacgattggattctcactttgtgttgtgcaggcagcgtgaggat
gtgtatcgcgtaattaaagcattcgcagtgaaaggtgaaagaataggtcctgaagcaaca
agatttctccagtgcttggtgaaagagtttgagcgcaatggagtaaaactatcgcagagc
aagggaaaagaaatggagaaattgaaatgccatatagatgaattgaacttgaagtatctc
caaaatctgaatgatttcaccaaattcctccttttaagcgaggatgagctagctggaatg
ccctttgagttcctaaaggatctggaaaaggctgaagggaagctgaaggttccgttaact
agttaccatgttactccaattctcgagcactgcaaggttggctctaccaggaagcaggtt
gctgttgcttatggacagaaaggtgggaaggataatctagccatcctagaaaatttggtt
cagctaagacacaagtttgcaagattgctggggtatgccaactatgctgattttgctatt
gagcccagaatgccaaggacatcaaggaaggtcttagagtttttggaagagatatcagaa
cagttaagtgatgtagctaatagagagctcagcatactcaaagaccttaagatgaaggag
gaaggaaatgctcatgtcggcatggaagatttgttgtactacatcaaaagagctgaagaa
ttcaaggttgatcttgacattggtgaaattaaacaatactttcctgttagcctggtcata
tctggaatgttgaagatgtttcaggatctattcgcactacgatttgatgaaactaaggat
gctgaagtttggcatgatacagttcgtgtgttttctgtctgggatgcaagttcaagtgat
ctcttgggttatttttttctcgatatctttgcgagggaaggaaagtattgccacacttgt
gttgtgacacttcaaaatggatgcttgtgttctaatggtacacgtaaggttccggctgct
gtgctattatctcaatgtccaaaagagtttgatgggaattcagcattgctgcggttccct
gaagttgtcaggctattccatgaatttagccatgtggtccatcacatatccaacagagtc
accttttcaaaattttcagctctccgactggagggtgacttcgctgaaattccaagcctg
ctactcgagaactggtgctacgagagcatttctctgaaaatgatgtccggcttccatcag
gacattacgaaatccataactagtgaagcttgccaatctctgaaaaggaggcgtgattta
tttgcaggcctgaaaatgaaacaggagatccttttgtgccttgttgatcagataatacat
tcaagtgagaatgtggatattgataacttaatcaaggagcttcatcccaaggtaatgttg
ggtatacctttattggaagggaccagtccagcttcgtgctttcctcgtattgctattggc
gatgatgctgtgtgctacagttacatatggagtgaggtttttgctgctgacctttttgta
tcaaaatttaaagacgacttgctcaatcagcatgcaggattgcgattcagaaataaggtg
ttggctccaggaggctcaaaagattcactggagattataactgactacctaggaagagaa
ccatccctccaatcttttattcagagcagaacaaggaacagtttgtga
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