Panicum virgatum (switchgrass): 120709073
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Entry
120709073 CDS
T07260
Name
(RefSeq) dynamin-related protein 3B-like
KO
K17065
dynamin 1-like protein [EC:
3.6.5.5
]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120709073
03029 Mitochondrial biogenesis [BR:
pvir03029
]
120709073
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pvir04147
]
120709073
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.5 dynamin GTPase
120709073
Membrane trafficking [BR:
pvir04131
]
Endocytosis
Clathrin-mediated endocytosis
Dynamin
120709073
Lipid raft mediated endocytosis
Caveolin-mediated endocytosis
120709073
RhoA-dependent endocytosis
120709073
Mitochondrial biogenesis [BR:
pvir03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Fission and Fusion factors
120709073
Retention of mitochondria
120709073
Exosome [BR:
pvir04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
120709073
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dynamin_M
Dynamin_N
GED
MMR_HSR1
AAA_16
Motif
Other DBs
NCBI-GeneID:
120709073
NCBI-ProteinID:
XP_039850525
LinkDB
All DBs
Position
5K:complement(59215304..59222358)
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AA seq
823 aa
AA seq
DB search
MAEDHYSSASAAAPSAAATAAAAAAAAVGSSVIPIVNKLQDIFAQLGSSSTIDLPQVAVV
GSQSSGKSSVLEALVGRDFLPRGSDICTRRPLVLQLVHQPRRPTDAEADEWGEFLHLSGR
RFYDFRDIRREIQAETDREAGGNKGVSDRQIRLKIFSPNVLNITLVDLPGITKVPVGDQP
TDIEARIRTMIMSYIRHKTCIILAVSPANADLANSDALQMARVADPDGSRTIGVITKLDI
MDRGTDARNFLLGNVIPLKLGYVGVVNRSQQDINSDLSIKDALAREEKFFHTQPAYHGLT
QYCGIPQLAKKLNQILVQHIKTVLPGLKSRISSQLTAVAKELAVYGDPVDSKAGQGAKLL
NILAKYCEAFSSMVEGKNEDISTIELSGGARIHYIFQSIFVKSLEEVDPYEDVTDEDIRM
AIQNATGPRSALFVPEVPFEVLVRRQISRLLDPSLQCAQFIYDELVKMSHRCLATELQQF
PILRRSMDEVIGKFLRDGLKPAESMIAHIIEMEEDYINTSHPNFIGGSKAVELAQQQVRS
AKMSSSVVRKDGVDADKVQASEKTQKMRAVLGRTVNGVITDHIQGVRPASEAERPGSSGS
ASTSFWNSIFTSNEDRAHASAKDNSANRSYTVPTPNLEHSFSTIQLREPPVVLKPSEHQS
EQEALEIAITKLLLKSYYNIVRKNVEDFIPKAIMHFLVNHTKRALHNYLITKLYRDDLLE
DLLKEPDEITIKRKQIRENLKVLQQAYKTLDEIPLDAEAVERGGYSLDSDVIGLPRAHGL
SSSLHGFNDGSSPYSTPKQSRSRRSNHSGEQPPFNTNMSGNGF
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atggccgaagaccactactcctccgcgtcggccgccgccccgtcggcggcggcgaccgcg
gcggccgctgcggcggcggcggtcgggtcgtcggtgatcccgatcgtcaacaagctgcag
gacatcttcgcgcagctggggagcagctccacgatcgacctgccgcaggtggccgtggtg
gggagccagagcagcggcaagtccagcgtcctcgaggcgctcgtcggccgcgacttcctc
ccgcggggctccgacatctgcacgcgccgccccctcgtgcttcagctcgtgcaccagccg
cgacgacccacagacgccgaggccgatgagtggggcgagttcctgcacctctcgggccgc
cgcttctacgactttcgagatatccggcgggagatccaggcagaaacggatcgggaggcg
ggtggtaacaagggtgtatcagataggcagatccgtttgaagattttttcaccaaatgtt
cttaacattactttggtcgatttgcctggaatcactaaggtgccagttggtgaccaacca
actgatattgaggccagaataaggactatgataatgtcatacatcagacacaagacatgt
atcatcttagctgtttcaccagcaaatgcagatttagcaaattctgatgctcttcaaatg
gctcgggttgctgatcctgatggttctcgaacaatcggtgttatcacaaagctggacata
atggacaggggcactgatgcccgcaactttctgctgggaaatgtgatccccttgaaactt
ggctatgttggcgtggtaaaccgaagccagcaggatatcaactctgaccttagtatcaaa
gatgctctggctcgtgaagaaaaattcttccatactcaaccagcatatcatggtcttact
cagtactgtggaataccacaattagcaaagaagctaaaccagatcctggtccaacatata
aaaacagttctgccagggcttaagtcacgcataagcagtcaattgactgctgttgctaag
gagcttgctgtgtatggtgatcctgttgactcaaaggccgggcaaggtgcaaagcttttg
aacattctagctaaatattgtgaagcattctcctcgatggtggaaggaaaaaatgaagat
atatcaaccattgaactttctggtggagcaagaatccattacatttttcagtctatcttt
gtaaaaagcttagaggaggttgacccctatgaggatgttacggatgaagacatccgcatg
gctatccaaaatgcaactggtcctagaagcgcgctgtttgtacctgaagtaccatttgaa
gtccttgtacgtaggcagatcagcagattgcttgatccaagtcttcagtgtgcacaattc
atatatgatgagctagtaaagatgagccatcgctgccttgcaacagagctgcagcagttt
cctatactccgccgaagcatggatgaagtaattgggaagtttttgcgggatgggcttaag
ccagcagaaagtatgatagcacacattattgagatggaggaggattacataaacacatca
cacccgaattttatcggtggcagcaaggctgtcgagctagcacaacagcaagttaggtct
gctaaaatgtcatcgtcggtggtaagaaaggatggagtagatgctgataaggtacaggct
tctgaaaagactcaaaaaatgcgtgcagtattgggcagaacagtaaatggagtaattact
gatcacatccagggggtaaggcctgcttccgaggctgagagaccaggatcttctggtagt
gcaagcacatccttttggaattcaatatttacttccaacgaggaccgtgcacatgcttct
gcaaaagataattcagcaaacagatcgtatactgtgccgacacccaatctggaacattca
ttctccacgatacagttaagagagccaccggtcgtccttaaaccttcagaacaccagtct
gagcaggaagcactcgaaatagcaatcacaaaattgctattgaagtcatattacaatata
gtcaggaaaaatgtggaggacttcatcccaaaagcaattatgcatttcctggttaatcac
acaaaaagggcgctgcataattacctcataacaaagctttacagagatgatctcttggag
gacttgctcaaagaacctgatgagataaccataaagaggaagcagataagagaaaatctc
aaggttcttcagcaagcttacaaaactttggacgagataccactcgacgcggaggcagtt
gagaggggtggctattcccttgactctgatgtgattggtctaccaagggcccacgggctt
tcgtcatccctacatggattcaatgatggaagttcaccatattcaaccccaaagcagtca
aggtcaaggagatccaaccattcaggggaacagccccctttcaataccaatatgagtggc
aatggtttttga
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