Panicum virgatum (switchgrass): 120709100
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Entry
120709100 CDS
T07260
Name
(RefSeq) casein kinase 1
KO
K08960
casein kinase 1, epsilon [EC:
2.7.11.1
]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pvir01001
]
120709100
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pvir03036
]
120709100
Enzymes [BR:
pvir01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
120709100
Protein kinases [BR:
pvir01001
]
Serine/threonine kinases: CK1 group
CK1 family [OT]
120709100
Chromosome and associated proteins [BR:
pvir03036
]
Eukaryotic type
Centrosome formation proteins
Kinases and associated factors
120709100
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
Pkinase_fungal
Kdo
APH
Motif
Other DBs
NCBI-GeneID:
120709100
NCBI-ProteinID:
XP_039850561
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Position
1K:41987997..41993914
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AA seq
464 aa
AA seq
DB search
MEHVIGGKFKLGKKIGSGSFGELYLGVNIQSGEEVAIKLESVKSRHPQLHYESKLYMLLQ
GGTGIPHLKWFGVEGEYNVMVIDLLGPSLEDLFNFCSRKFSLKTVLMLADQMIARVEYMH
TRGFLHRDIKPDNFLMGLGRKASQVYVIDYGLAKKYRDLQTHKHIPYRENKNLTGTARYA
SVNTHLGVEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYDKISEKKMLTSIEAL
CKSYPTEFVTYFHYCRSLRFEDKPDYSYLKKIFRDLFMREGYQHDYVFDWTVARQAADNN
RLRLSGRGGLVGPSADRAERAAARQDVPDRFPGPVDAFGRRTGSGSGHYGEHTKHRSLLD
TLLAPKTTVDSDRRRLSSSRNGSTSRKALLSSSRGSGDPSDPNRSSHLVPTSSGSSRPSA
NQRLHQSTGLEGRTSSLSKPGRVVHEDPTTRNFERLTISADRRK
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atggagcacgtgatcggagggaagttcaagctggggaagaagattgggagcggatctttc
ggggagctctacctcggcgtcaacatacagagcggcgaggaggtggctatcaagttggaa
tctgtcaaatcaaggcatcctcagcttcattatgagtcaaagctatacatgcttctccaa
gggggaactgggattcctcatttgaagtggttcggagtggagggggagtacaatgtcatg
gtcattgatcttcttggtccaagtctggaggacttattcaacttttgcagcagaaaattc
tctcttaaaacagtacttatgctagctgatcagatgatagcgagggtagagtacatgcac
acgagggggtttcttcatcgtgatatcaagccagacaacttccttatgggcttaggccgt
aaagcaagccaggtttatgtcattgactatggccttgccaagaagtaccgggacctccaa
actcataaacacataccatacagggagaataaaaatctcacaggaacagcacgatatgct
agtgtaaacacccatcttggagtagaacaaagcaggagagacgacctagagtcccttggt
tacgtgctgatgtatttcttgagaggaagccttccttggcaaggcttgaaagccggcaca
aaaaaacagaagtatgacaaaattagtgagaagaaaatgctaacttcgattgaggccctc
tgtaaatcttatccaacagaattcgttacatacttccattattgccgatctttacgattt
gaagacaagccagactatagctatttgaagaaaatcttccgggatttattcatgcgtgaa
gggtaccagcatgattatgtctttgattggactgtagcaaggcaagctgcggacaataac
agattgcgactgagtgggagaggtgggttggtgggaccatcggcagaccgagctgagcgg
gctgcagcgcgacaggatgttccggatagattccctggtccagttgatgcatttggtaga
agaaccggctctggttctggccattatggtgaacacacaaagcacagatctctattggat
actcttttagcacccaagacgactgttgattcagatagaagaaggctttcatcatcgcga
aatgggagcacgtcaaggaaggcccttctgtcaagcagcagaggctctggagatcccagt
gacccgaaccgcagtagccacctagttccgaccagcagcggcagcagccgcccatcagct
aatcaaaggcttcatcagtcaacaggacttgagggcaggacctcatcattgtcaaaaccc
ggaagggtcgtccatgaggatcccactacgaggaactttgaacgccttactatcagtgca
gacaggaggaaatga
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