Panicum virgatum (switchgrass): 120709119
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Entry
120709119 CDS
T07260
Name
(RefSeq) formin-like protein 20
KO
K15559
regulator of Ty1 transposition protein 103
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pvir03021
]
120709119
Transcription machinery [BR:
pvir03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
120709119
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
CTK3
CCDC93_CC
IZUMO
TEX13
Motif
Other DBs
NCBI-GeneID:
120709119
NCBI-ProteinID:
XP_039850582
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All DBs
Position
5K:complement(59761186..59767555)
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AA seq
511 aa
AA seq
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MSAGFNKQILAQKLAKLNSSQQSIETLSHWCVFHHRYCRLVVETWDCEFHVASSERRLSL
LYLANDIMQNSRKEGNGYITEFMRVIPAALNEVLTIRDDLGRNVVKRLIDIWEDRKIFDT
QGQSLKDDFFRRLKDIRNKLKNPAGELLEKVVSSYKHVLNAPMDEDTLMRKCQAAIINFD
ELNKAYGNNSFFGSSNQSGVEELQQQHSILRNSIEQLKMSESLRATLIHHLKEALNEQEL
KVEQVRGQLQAAQSRYKKAGELCQGLGIDVEKPQPSNQGLKSSLSETHASISPDSASTKS
LQRGQSSAVLYSQEGNGAGHNAISANVLTKLAVGAVSDKISDSVLPSRANGGNTAVKIDE
HSSGNKRQKLEDDTHISQPQSESPPPPPPFPHPDAFQPPPPPEYPPSPEPSPPPPPPTST
PPHIIPPPPPDTMPPPIISALPPTAGTFVPFPAGPPGPMYGAFPFTPVVNFPMNIPPGFH
SPPTPPPAFQGLSGTFYGPPFPTAPPPTDKK
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgggttttaacaagcagatcttggctcagaagctcgcaaagcttaatagctca
caacagagcattgagactttatcacattggtgtgtatttcatcatcgctactgccgacta
gttgtagaaacatgggattgcgagttccatgttgcttctagtgagaggaggctatctttg
ctgtacctcgcaaatgatattatgcagaatagcagaaaggaaggcaatggatatataact
gagttcatgagggtcatccctgctgccttgaatgaagtgttgactatcagagatgatctt
ggacggaatgttgtaaaaagactgattgacatatgggaagaccgtaaaatatttgatact
cagggacagagccttaaggatgactttttcaggaggttaaaggacataagaaacaagttg
aaaaatccggctggtgagctgctggagaaggttgtctcaagctacaaacatgtactgaat
gctcctatggatgaggacactctgatgcgaaaatgtcaagctgctattattaatttcgat
gaactcaataaagcatacggaaataactcgttttttggtagcagcaatcaatctggtgtt
gaggagctgcagcaacaacatagcatactcagaaactccattgaacaactcaaaatgtca
gaatcactgagggccactcttattcatcatttgaaggaagcactgaatgagcaggagctc
aaagtggaacaagtgagaggccagcttcaggcagctcaatctcgatacaagaaagctggt
gagctctgccaggggcttggaattgacgtggaaaaacctcagccatctaaccaagggctt
aaatccagtctctctgaaacgcatgcttccatttccccagattcagctagtacaaaatct
cttcagaggggacagtcaagtgcagtgttgtattcacaggagggaaatggtgctgggcac
aatgccatatcagctaatgtattgacgaagcttgctgtaggtgctgtttcagacaagatc
agtgatagtgttttgccttcacgagccaatgggggcaatactgcagtgaagatagatgag
cactcttctggtaacaagaggcagaagctagaggatgacacacatatttctcagcctcaa
tcagagtcaccaccaccaccacccccgttcccgcatcctgatgcatttcaaccaccacca
ccaccagagtatcctccatcaccggagcctagccccccaccaccaccgccaacttcaacg
ccaccccatataattcccccgcctccgccagacacaatgccacccccaattatctcagct
ctaccaccaacagctggtacatttgtaccttttcctgctggacctcctggtccaatgtat
ggcgcttttccatttactcctgtggtcaactttcccatgaacattccacctggtttccac
agtcctccaactccacctccagcttttcaaggattatcgggtacattctatgggcctcca
ttccccacagcacccccaccaacagacaagaaataa
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