Panicum virgatum (switchgrass): 120709120
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Entry
120709120 CDS
T07260
Name
(RefSeq) disease resistance protein RPP13-like
KO
K15559
regulator of Ty1 transposition protein 103
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pvir03021
]
120709120
Transcription machinery [BR:
pvir03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
120709120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NB-ARC
LRR_14
Rx_N
WH_DRP
LRR_At5g56370
AAA_16
AAA_22
AAA_30
nSTAND3
NACHT
TsaE
Motif
Other DBs
NCBI-GeneID:
120709120
NCBI-ProteinID:
XP_039850584
LinkDB
All DBs
Position
5K:complement(59768515..59772004)
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AA seq
923 aa
AA seq
DB search
MAETAITTVLAKVSELVAWEAAVLLEVGDDVRLLRDKLEWLHTFIRDADRRRRLRDDEFV
AVWVRQTRDVAFEAEDALDDFLHRAGRRGRAARNRAAPGCAAGWWPGCAGEVALRHDLYG
RIRQIKKRLDEISANRAAYNIEHTPAPAWATSCSSATTLAAWDDLEEYTVGLGKYSDMLK
EQLLDDAVAARAVVSISGESSIGKTTLARKVYQSPEVRNHFEIRTWTVLPHKCRAADVLR
DIHKQMTSQLRRAPSRQVAAEDGKACGGPGKDISNQLHKSMAGRRYLVVVDGSIAVTDWN
SLRASLPDEGNGSRVLLITDSAGLEAVGHAGGHAYEPVELTRLSPENTYEVFRRRVFGRG
DCPGRYKSRYYQDVFRITRGLPLSIVILAGVLRSKELPAEWDEVMAQLAPAREQQHKGGS
SSSSRRIMSLAFDDLPHHLKSCFLYLAAMRESTPVDAQRLVRLWVAEGFVRPRRGSTMEE
VGQGYLKELISRCVVQLVDKDEFGAVQTVVVHDRLHAFAQDEAQEASFVESHDGTDVLAP
ATVRRLAVVSSTTDRYVQLSNALPKLRSIICDLVEGRSNSNNRCIRCSDLGFLHASKFLR
VIDIQGLELKKLPNEIGSMIHIRYLGLQCGDLEKLPSSIGNLVNLQSLILGGRHHVLEVT
AAFWRIPTLRHVVAPFALPSRALGDLPSLQTLHGVQPRGWDGGAGNPLAKAANLRSLELS
ELTANHAGALEAALESLDLLVHLSLRGDSLPASVFSVPSLRRLQSLKLWGAVDAPEGPAG
AEDVRYIRPNLTRLSMWSTMVRQKFVNMLAELPSLGELTLMLDAYDGDRLAFGDAGFRSL
HRLKLALPKLEDWAVGAGSMPGLATLTLYRCARMRMLPEALAGMEQLEEVVLYSMPDMVG
RIKEGQGQDHHKVKHVPVIQTIY
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atggcggagacggcgatcacgacggtgctcgccaaggtgtcggagctggtggcgtgggag
gcggcggtgctgctcgaggtgggcgacgacgtgcgcctcctccgcgacaagctcgagtgg
ctccataccttcatccgcgacgccgaccgcaggcgccgcctccgcgacgacgagttcgtc
gccgtctgggtgcgccagacccgggacgtcgccttcgaggccgaggacgcgctcgacgac
ttcctccaccgcgccggccggagggggagggccgcccggaaccgcgccgcaccgggatgc
gccgccggctggtggcccgggtgcgccggcgaggtcgcgctccggcatgacctctacggc
cgcatccgccagatcaagaagcgcctcgacgagatctccgccaaccgcgccgcctacaac
atcgagcacacccccgcgccggcctgggccacctcctgctcctccgccaccacgctcgcc
gcctgggacgacctggaggagtacacggttgggttgggcaagtacagcgacatgctgaaa
gagcagctcctggacgacgccgtggccgcgcgcgccgtcgtgtccatctccggcgagagc
agcatcggcaagacgacgctggcgcggaaggtgtaccagagccccgaggtgcgcaaccac
ttcgagatccgcacgtggacggtgctcccgcacaagtgccgcgccgccgacgtcctccgc
gacatccacaagcagatgacctcccagctgcggcgggctccgtccaggcaggtcgccgcc
gaagacggcaaggcgtgcgggggccccggcaaggacatcagcaaccagctgcacaagagc
atggcggggaggcggtaccttgtggtcgtcgacggcagcatcgccgtcaccgactggaac
agcctgcgcgcctcgctccccgacgagggcaacggcagcagggtgctcctgatcacggac
tcggcgggcctggaggcggtcgggcacgccggggggcacgcgtacgagccggtcgagctg
acccggctcagcccggagaacacgtacgaggtgttccggcggcgggtgttcgggcgcggc
gactgccccggccggtacaagtcgagatactaccaggacgtgttccggatcacgcgcggc
ctgccgctgtccatcgtcatcctcgccggcgtgctgcggtccaaggagctgccggcggag
tgggacgaggtgatggcgcagctggccccggcgcgggagcagcagcacaaagggggcagc
agcagcagcagccgtcggatcatgtcgctggccttcgatgacctgccgcaccacctcaag
tcgtgcttcctgtacctggcggcgatgcgggagagcacgccggtggacgcgcagcggctg
gtgcgcctgtgggtggcggaggggttcgtgcggccgcggcgcgggagcaccatggaggag
gtcgggcaggggtacctcaaggagctcatctcccgctgcgtggtgcagctggtggacaag
gacgagttcggcgccgtgcagacggtggtggtgcacgaccggctgcacgccttcgcgcag
gacgaggcgcaggaggccagcttcgtcgagagccacgacggcaccgacgtgctcgcgccg
gccaccgtgcgccgcctcgccgttgtcagctccaccaccgacaggtacgtgcagctcagc
aacgcgctgcccaagctgcgctccatcatctgcgacttagtggagggtcgcagcaacagc
aacaacaggtgcatccggtgcagcgacctgggcttcctccatgcctccaagttcctccgt
gtcatcgacatccaggggctcgagctcaagaagctcccaaacgagatcggctccatgatc
cacatcagatacctgggcctccaatgcggcgacctggagaagctcccgagcagcatcggc
aacctcgtcaacctgcagtcgctcatcctcggcggccgccaccacgtcctggaggtgacc
gcggcgttctggaggatccccacgctgcggcacgtcgtcgcgccgttcgcgctgccgagc
cgcgccctgggcgacctgcccagcctccagacgctgcacggcgtgcagccccggggctgg
gacggcggcgccggcaacccgctggccaaggccgccaatctgcggtcgctggagctcagc
gagctgaccgccaaccacgccggcgcgctcgaagccgcgctggagagcctcgacctcctg
gtgcacctctcgctgcgcggcgactcgctgccggcgagcgtgttcagcgtgccgagcctc
cgccggctgcagagcctcaagctctggggcgccgtggacgcgccggagggccccgccggc
gcggaggacgtccggtacatccggccgaacctgacccggctgtcgatgtggagcacgatg
gtgaggcagaagttcgtcaacatgctggcggagctgccgagcctgggcgagctgacgctg
atgctggacgcctacgacggcgaccggctggcgttcggggacgctgggttccggagcctg
cacaggctcaagctcgccctgcccaagctggaggactgggcggtgggcgcgggctccatg
ccggggctcgccacgctgacgctgtaccggtgcgccaggatgcggatgctcccggaggcg
ctcgccgggatggagcagctggaggaggtggtgctctacagcatgcccgacatggtgggc
aggatcaaggagggccaagggcaggaccaccacaaggtcaagcacgtccccgtcatccag
accatctactga
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