Panicum virgatum (switchgrass): 120709260
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Entry
120709260 CDS
T07260
Name
(RefSeq) uridine 5'-monophosphate synthase
KO
K13421
uridine monophosphate synthetase [EC:
2.4.2.10
4.1.1.23
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00240
Pyrimidine metabolism
pvir01100
Metabolic pathways
pvir01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
120709260
Enzymes [BR:
pvir01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.10 orotate phosphoribosyltransferase
120709260
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.23 orotidine-5'-phosphate decarboxylase
120709260
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Gene cluster
GFIT
Motif
Pfam:
OMPdecase
Pribosyltran
Motif
Other DBs
NCBI-GeneID:
120709260
NCBI-ProteinID:
XP_039850749
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Position
5K:61066455..61070785
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AA seq
475 aa
AA seq
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MDAAALESLILDLHAIEAVKLGSFVLKSGITSPIYLDLRALVSHPRLLSAIASLLHALPA
TRPYGLVCGVPYTALPIAAVLSVDRNIPMLMRRKEVKAHGTAKSIEGSYRAGDTVLIIED
LVTSGASVLETAAPLRAEGLVVADAVVVVDREQGGRENLAANGITLHSLMTLTEVLAVLL
KHGKVTQEKAEEVRQFLDANRKVAVPGVPAKPRVFRKPFEERAKSATNPVARRLFEVMVA
KQSNLCVAADVGTAKELLELAEQIGSQICMLKTHVDILSDFTPDFGSKLRSIADKYNFLI
FEDRKFADIGNTVTMQYEGGIFRILDWADIVNAHIVPGPGIVDGLKLKGLPKGRGLLLLA
EMSSAGNLAQGDYTAAAVKIAEQHPDFVIGFISVNPASWSVAPSNPALIHATPGVQLVAG
GDSLGQQYNTPQAVINVRGSDIIIVGRGIIKASDPAKTALEYRLQGWQSYRTSLL
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atggacgccgcggcgctcgaatccctcatcctcgacctccacgccatcgaggccgtcaag
ctgggctccttcgtgctcaagtccggcatcacctcgcccatctacctcgacctccgcgcg
ctcgtctcccacccgcgcctcctctccgccatcgcctccctcctgcacgccctccccgcc
acgcgcccctacggcctcgtctgcggcgtcccctacaccgcgctccccatcgccgccgtc
ctctccgtcgaccgcaacatccccatgctcatgcgccgcaaggaggtcaaggcgcacggc
accgccaagtccatcgagggatcctaccgcgccggcgacaccgtcctcatcatcgaggac
ctcgtcaccagcggcgcatccgtgctcgagaccgccgccccgctccgcgccgaggggctt
gtcgtcgcggatgccgtcgtcgtcgtcgaccgcgagcagggcggcagggagaatctcgcc
gccaacgggatcacgctgcactcgctcatgacgctcacggaggtgctcgccgtgctgctc
aagcacggcaaggtgacccaggagaaggcggaggaggtgaggcagttcctcgacgcaaac
aggaaggtggccgtcccgggggtgcctgctaaacccagggtgtttaggaagccatttgag
gagagggcgaaatctgccaccaaccctgtggccaggaggctcttcgaggtgatggtggcc
aagcagagcaacctgtgcgtagctgcagatgttggcacagcaaaggagctccttgagctg
gccgagcagattggttcccagatttgcatgttgaaaacccatgtggatatattatctgat
tttacaccagattttggctccaagcttcgctcgattgctgataagtacaactttttgatc
ttcgaagaccgcaagtttgctgacatcgggaatacagtaaccatgcaatatgaaggagga
atattccgcatattggactgggctgatattgttaatgcgcatatagtacctggacctgga
attgtagatggtttgaagctgaagggtttgcctaaaggaagagggctacttctgcttgct
gaaatgagctctgctggcaaccttgctcagggagattacactgctgcagctgtaaagatt
gctgagcagcatcctgactttgtaattgggtttatatcagtaaatcctgcatcttggtca
gtagcaccatcaaacccagcacttatccatgcaacccctggagttcagctggtcgctgga
ggagattctcttgggcaacaatacaacactcctcaagctgtcataaacgtcagaggcagt
gatatcattatagtgggacgcgggattatcaaagcgagcgatcctgctaagacggcattg
gagtatcgcctccaggggtggcaatcctaccgcaccagcttgttgtga
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