Panicum virgatum (switchgrass): 120709331
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Entry
120709331 CDS
T07260
Name
(RefSeq) syntaxin-61-like
KO
K08500
syntaxin of plants SYP6
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
120709331
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120709331
Membrane trafficking [BR:
pvir04131
]
SNARE
SNAP-25[C] (Qc)
STX6
120709331
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GFIT
Motif
Pfam:
STX6_10_61_N
SNARE
MCU
DUF6366
Motif
Other DBs
NCBI-GeneID:
120709331
NCBI-ProteinID:
XP_039850876
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All DBs
Position
5K:complement(61721267..61724852)
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AA seq
232 aa
AA seq
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MSSAQDPFYIVREEIQDSIDKLQSTFHRWQQTASNTGEYVHLTKEFLTSCESIEWQVDEL
EKAITVASRDPAYYGLDEVELSRRKNWTGSARNQVGTVRRAVEKGKSNSATSKYQDTNRT
NLYSAQDNDDFISSESDRQQLLMRQQDEELDELSASVQRIGGVGLTIHEELSGQERILND
LSLEMETTSNRLDFVQKRVAMVMKKAGIKGQIMLIAFLVVLFIILFVLVFLT
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atgagctcggcgcaagatccgttctacatcgtccgggaggagatccaggactcgattgat
aaactgcaaagcaccttccaccgctggcagcaaactgcttccaacacaggagaatatgtt
cacctcacaaaggagtttcttaccagctgtgaaagcattgagtggcaggtagatgagctg
gaaaaggcaatcactgttgcatcacgggatccagcatactatggacttgatgaggtcgag
ctttctagacgaaaaaactggactggttctgcccgtaatcaggttggtacagtcaggaga
gctgttgaaaaggggaagagcaattcagcaacttcaaaataccaggacacaaacaggact
aacctctattctgcccaagacaatgatgacttcatttcttcagaatcagatagacagcag
ctactcatgaggcagcaggatgaagaacttgatgagctcagtgcgagtgtccagaggatt
ggtggtgtagggctaaccatacacgaagagctgtctggacaggaaaggatcttaaacgac
ctaagcttggagatggagactacttccaaccgacttgattttgtgcagaaaagagtggcc
atggtgatgaagaaggctggcatcaaggggcagattatgttgattgcgttcctggtcgtt
ctattcattattctcttcgttttggtgttcttgacatag
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