Panicum virgatum (switchgrass): 120709334
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Entry
120709334 CDS
T07260
Name
(RefSeq) actin-7-like
KO
K10355
actin, other eukaryote
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
120709334
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pvir04812
]
120709334
Cytoskeleton proteins [BR:
pvir04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actins
Actins
120709334
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Actin
DUF6581
Motif
Other DBs
NCBI-GeneID:
120709334
NCBI-ProteinID:
XP_039850884
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All DBs
Position
5K:complement(61763094..61766448)
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AA seq
377 aa
AA seq
DB search
MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL
DLAGRDLTDSLMKILTERGYSFTTSAEREIVRDIKEKLAYVALDYEQELETAKNSSSVEK
SYELPDGQVITIGAERFRCPEVLFQPSMIGMESPGIHETTYNSIMKCDVDIRKDLYGNIV
LSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIS
KEEYDESGPAIVHRKCF
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atggctgacggtgaggatatccagcctcttgtctgtgacaatggaactggaatggtcaag
gctggttttgccggtgatgatgcaccaagggctgttttccctagcattgttggtcgacct
cgccacactggtgtgatggtagggatggggcagaaggatgcatacgttggggatgaggca
cagtccaagagaggtattctcacgttgaagtacccaatcgagcatggtattgtgagcaac
tgggatgacatggagaagatctggcatcacactttctacaatgagctccgtgttgcacct
gaggagcacccagtgttgctcacggaagctcctttgaaccccaaagctaacagggagaag
atgacacagattatgtttgagaccttcaatgtgcctgccatgtatgttgctattcaagcc
gtgctttcactctatgctagtggtcgtacaacaggtatcgttcttgactctggtgatggt
gtgagccacactgtgcccatttatgagggatatgcgcttcctcatgctatcctccgtctg
gatcttgctggccgtgacctcacggattctcttatgaagatcctcactgagagaggatac
tctttcaccacctctgctgagcgggaaattgtgagggacatcaaggagaagcttgcatat
gtggcccttgattatgagcaggagctggagactgccaagaacagctcctcggttgagaag
agctacgagctgcctgatggccaggtgattaccatcggcgcggagaggtttaggtgccct
gaggtcctcttccagccatccatgatcggcatggaatcccctggaatccacgagactacc
tacaactccatcatgaagtgtgatgtggatatcaggaaggacctgtacggcaacattgtg
ctcagtggaggctcaacaatgttcccaggcatcgctgaccgtatgagcaaggagatcacc
gctcttgctccgagcagcatgaagatcaaggtggttgctccacctgagcgcaagtacagt
gtctggatcggagggtctatcctagcttctctcagcaccttccaacagatgtggatatca
aaggaggagtacgatgaatctggcccagcaatcgtccacaggaagtgcttctga
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