Panicum virgatum (switchgrass): 120709395
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Entry
120709395 CDS
T07260
Name
(RefSeq) probable aquaporin TIP1-2 isoform X1
KO
K09873
aquaporin TIP
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvir02000
]
120709395
Transporters [BR:
pvir02000
]
Other transporters
Aquaporins and small neutral solute transporters [TC:
1.A.8
]
Aquaporins
120709395
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIP
DUF992
Motif
Other DBs
NCBI-GeneID:
120709395
NCBI-ProteinID:
XP_039850965
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All DBs
Position
5K:complement(62198015..62200094)
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AA seq
252 aa
AA seq
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MPVSRIAVGAPGELSHPDTAKAAVSEFISVLIFIFAGSGSGMAFSKLTAGGATTPAGLIA
ASLAYALALIVSVSIGANISGGHANPAVTFGAFVGGNITLFKAVVYWVAQLLGSVVACLL
LKIATGGAAVGALSLSAGVGAWNAVVFEIVMTFGLVYTVYATAVDPKKGDLGVIAPIAIG
FIVGANILAGGAFDGAAMNPAVAFGPAVVTGVWENHWVYWLGSFVGAAIAALVYDIIFIG
QRPHDQLPATDY
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atgccggtgagcaggatcgccgtgggcgctccgggcgagctgtcgcaccctgacactgcc
aaggctgccgtctccgagttcatctccgtgctcatcttcatcttcgccggctccggatcc
ggcatggccttcagcaagctcaccgccggcggcgcaaccactcctgctggcctcatcgcc
gcgtctctggcgtacgccctggccctcatcgtctccgtctccatcggcgccaacatctcc
ggcggtcacgccaacccggccgtcacgttcggcgccttcgtgggcggcaacatcaccctc
ttcaaggccgtcgtctactgggtggcgcagttgctcggctccgtcgtcgcctgccttctc
ctcaagatcgccaccggcggggcggctgtgggcgccctatctctgtccgccggcgtgggc
gcctggaacgccgtcgtcttcgagatcgtcatgaccttcggcctcgtctacaccgtgtac
gccaccgctgtggaccccaagaagggcgacctcggcgtcatcgcgcccatcgccatcggc
ttcatcgtcggcgccaacatcctcgccggcggcgcattcgacggcgccgccatgaacccc
gccgtggccttcggcccagccgtcgtcaccggcgtgtgggagaaccactgggtgtactgg
ctcggctccttcgtgggcgcggccatcgcagcgctcgtctatgacatcatcttcatcgga
cagcgcccgcacgaccagctgcccgccaccgactactga
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