KEGG   Panicum virgatum (switchgrass): 120709514
Entry
120709514         CDS       T07260                                 
Name
(RefSeq) transcription initiation factor TFIID subunit 7-like
  KO
K03132  transcription initiation factor TFIID subunit 7
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    120709514
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pvir03021]
    120709514
   03036 Chromosome and associated proteins [BR:pvir03036]
    120709514
Transcription machinery [BR:pvir03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     120709514
   Coactivators
    SAGA/TFTC/STAGA complex
     120709514
Chromosome and associated proteins [BR:pvir03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    TFTC complex
     120709514
SSDB
Motif
Pfam: TAFII55_N Emfourin
Other DBs
NCBI-GeneID: 120709514
NCBI-ProteinID: XP_039851118
LinkDB
Position
5K:33999171..34002850
AA seq 198 aa
MEEQFILRVPPSVAERIKRLMNESAAASSSSSNPDDTSLDLSFSEDGRNGTFMIGNESFP
ASLLDLPAVVESYKTYDDSVLIKTADIGQMIMVREENDPAPEGVEYKHGLTPPMRDARRR
RFRREPDLNAELVNQVEKHLINIMHGVSVNQNASVIGGEEGGDSKKHPVARAPKQPDVQE
PTANGEEPERSDLEESEN
NT seq 597 nt   +upstreamnt  +downstreamnt
atggaggagcagttcatcctccgcgtgccgccgtccgtggcggagcggatcaagcgcctc
atgaatgaatccgccgccgcgtcctcctcctcctccaaccctgacgacacctccctcgac
ctctccttctcagaggatggaagaaatggtacatttatgataggtaatgagagctttcct
gcatctctcttggatctacctgcggtggtggagtcgtacaagacgtatgatgattctgta
ctaattaaaactgctgatattggtcagatgattatggtaagagaagaaaatgaccctgct
ccagagggagtagaatacaagcatgggcttactcctccaatgagggatgcacgcagacgc
cgtttccgcagagaaccagatttgaatgcggagcttgttaaccaagttgaaaagcatctc
atcaatattatgcacggagtatctgtcaaccagaatgccagtgtgataggaggcgaggaa
ggtggtgatagtaagaaacatccagtggctcgtgcacccaagcagcctgatgttcaagag
ccaactgcgaatggtgaggaacctgagaggagcgacttggaggagtctgagaattga

DBGET integrated database retrieval system