Panicum virgatum (switchgrass): 120709519
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Entry
120709519 CDS
T07260
Name
(RefSeq) BTB/POZ and MATH domain-containing protein 1-like isoform X1
KO
K10523
speckle-type POZ protein
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvir04121
]
120709519
Ubiquitin system [BR:
pvir04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
120709519
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GFIT
Motif
Pfam:
BACK_BPM_SPOP
BTB
MATH_2
BTB_KLHL33
Motif
Other DBs
NCBI-GeneID:
120709519
NCBI-ProteinID:
XP_039851128
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Position
5K:34084548..34086414
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AA seq
366 aa
AA seq
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MEHDGTNLTVTEAVRSVQLLKIDGYCATAAMETSEFIKSRWNIYGHEWEVRFYPNYWHFF
EDLEETYYQFDDDYHTEWVALKLILVSEPQRDKLRVNLSCRLVCPSQHLDPSEEKIVSHV
FDSHSKCSPEVLLMPKHVLPSSGYIVNDSLTVECTITVLGHFDTADKEQPLPVPPPSDLH
QHLGELLESQDGADITFHVSGESFAAHKVILAARSPVFKAKFFGGMEETSSESVVIEDME
AAVFKSMLHFIYTDMAPELDGDLEPQAAATKAQHLLAAADRYGLNRLKLICECKLSGGID
IGIAATTLALAEQHHCSLLKAKCLEFVTKSPETLDAVLATDGYAHLVASCPLVLTELLRA
ARGRKI
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atggaacatgacggcacgaacctgactgtcactgaggctgtgcgctccgtgcagctgctc
aagattgacggctactgtgccaccgctgccatggagacatcggagttcatcaaatccaga
tggaatatctatggccacgagtgggaggtccgtttctatcctaattactggcacttcttc
gaggacttggaggaaacgtactaccaattcgatgacgattaccacaccgagtgggtcgct
ctgaagctcatccttgtcagtgaaccccagagggacaagctgagggtgaatctgagctgc
cggcttgtatgccccagccagcatctcgatccctccgaagagaagattgtgtcccatgta
tttgacagccactccaaatgctcgcctgaagttctcctcatgccgaaacacgtcctacca
tcatcaggttatatcgtgaatgactcactgaccgtggaatgcacaatcaccgtgctaggc
cacttcgacaccgcggataaggagcagcccctgccagtgccgccaccgtcggacctacac
cagcacctcggtgagctcttggagagccaagatggagcggacatcacgtttcatgtctct
ggggaatccttcgccgcccacaaggtcatacttgccgcaaggtccccggttttcaaggcc
aagttcttcggaggcatggaggaaacaagctccgaatctgtggtgatcgaagacatggag
gctgctgtgttcaagtccatgcttcacttcatctacactgacatggctccggagctcgac
ggtgacctggagcctcaggcagcggcgaccaaggctcagcacctcctggcagctgcagac
aggtatgggctgaacaggctcaagctgatatgtgaatgcaagctctctggtggcatcgac
attggcatagcggccaccacgttggctctcgccgagcagcaccactgctcgctgctcaaa
gccaagtgtcttgagttcgtcaccaagtcgcctgaaactcttgatgctgtcttggcaact
gatggctacgcgcatctggtggcaagctgccccttggtgctgactgaactactgagggct
gcgcgtggaaggaagatctga
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