Panicum virgatum (switchgrass): 120709843
Help
Entry
120709843 CDS
T07260
Name
(RefSeq) replication protein A 32 kDa subunit B-like isoform X1
KO
K10739
replication factor A2
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03030
DNA replication
pvir03420
Nucleotide excision repair
pvir03430
Mismatch repair
pvir03440
Homologous recombination
pvir03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
120709843
03420 Nucleotide excision repair
120709843
03430 Mismatch repair
120709843
03440 Homologous recombination
120709843
03460 Fanconi anemia pathway
120709843
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pvir03032
]
120709843
03400 DNA repair and recombination proteins [BR:
pvir03400
]
120709843
DNA replication proteins [BR:
pvir03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
120709843
DNA repair and recombination proteins [BR:
pvir03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
120709843
MMR (mismatch excision repair)
120709843
DSBR (double strand breaks repair)
HR (homologous recombination)
120709843
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_anti-codon
RMI2
RPA_C
Motif
Other DBs
NCBI-GeneID:
120709843
NCBI-ProteinID:
XP_039851418
LinkDB
All DBs
Position
1K:complement(42900844..42905121)
Genome browser
AA seq
289 aa
AA seq
DB search
MYGGGGHYGGDGGGAANANSLFGGGGFMPSQSTAVPESSGGVSKGRNAQTLLPLTVKQIM
DAAQASDDKSNFTINGVEVSTVRLVGRMLGKIERVTDVQFTLDDGTGKIDVNRWENESSD
TKEMADVNDGNYVIVNGGLKGFQGKRHVVAYSVRRVTNFNDITHHFLHCIYVHLELTRSK
SRSPPQINSGTATPVHVNQVRPPNIQATSFLGSGNTSENDVSSLIMNVFHDPAIIDREDG
ITKAYVIERLKLPEDMVRYFHHNMFICSACSILSWYRQDVPLNCLMSFT
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgtacggcggcggcgggcactacggcggcgatggcggcggcgccgcgaacgccaactcc
ctcttcggcggcgggggattcatgccctcgcagtccaccgcggtcccggagagcagcggc
ggcgtctccaagggccggaacgcgcagacgctgctgccgctcaccgtgaagcagatcatg
gacgcggcgcaggccagcgacgacaagtccaatttcaccatcaacggcgtcgaggtgtcc
acggttaggcttgttggacgcatgctgggtaagattgagcgggtcacagatgttcaattc
actcttgatgatggtaccggcaagatagatgtgaatcgctgggaaaacgagtcttccgac
actaaggaaatggctgatgtcaatgatgggaactatgtcattgtcaatggtggtttgaaa
ggttttcaaggaaagcgccatgtggttgcttactctgttcggcgtgtgacaaacttcaat
gatataacacatcactttctgcactgcatttatgtgcatttggaactcaccaggtcaaag
tcacggtcgccaccccaaataaattctggtacagcaacccctgtacatgttaaccaagtt
cggccccccaatattcaggctacatcattcttgggatcaggaaatacttctgaaaatgat
gtatccagcttgatcatgaatgtttttcatgacccagcaatcatagaccgggaggatggg
ataactaaagcatatgtcatagagcgtcttaaactaccagaggacatggtcaggtatttt
caccacaatatgttcatttgttcagcttgctctatattatcatggtacagacaagatgta
ccattaaattgtctgatgtcttttacttag
DBGET
integrated database retrieval system
