Panicum virgatum (switchgrass): 120709938
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Entry
120709938 CDS
T07260
Name
(RefSeq) putative pectinesterase 11
KO
K01051
pectinesterase [EC:
3.1.1.11
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00040
Pentose and glucuronate interconversions
pvir01100
Metabolic pathways
Module
pvir_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
120709938
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.1 Carboxylic-ester hydrolases
3.1.1.11 pectinesterase
120709938
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Motif
Pfam:
Pectinesterase
Adeno_E1B_55K
Motif
Other DBs
NCBI-GeneID:
120709938
NCBI-ProteinID:
XP_039851490
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All DBs
Position
5K:complement(41113478..41115070)
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AA seq
294 aa
AA seq
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MPGPRRRQLILTVDQSGRGDHRRVQDAVDAAPANSSAGSVVVIRIKPGLYRQKVVLDKPC
VTLVGTSASSTVITWNEAWVAADSPTVSVLAPDFIAKRLTFQNTFGTSGPAVAMRVAEDR
AAFYGCRFVSFQDTLLDDTGRHYYRGCYIEGGTDFIFGNARALFDKCHLHSTSLVGGAFT
AHKRSAESEDTGFSFVGCKLTGVGKSTSILGRPWGPYSRVVFALSYMSSTVRPEGWDGWS
EDPAKQRTAFYGQYQCYGEGSWTEGRVAWSRDLSQAEAAPLITKVWVDGQEWLQ
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgccgggcccgcggcgccggcagctcattctcacggttgatcagtccggccgaggcgac
caccggagggtccaggacgcggtcgatgctgcacccgcgaacagctccgccggcagcgtc
gtcgtcatccggatcaagcccgggctgtacaggcaaaaggtggtgctggacaagccctgc
gtaactctcgtcggcacgagcgccagctccaccgtcatcacctggaacgaggcctgggtc
gccgccgacagcccgaccgtgtccgtgctggcccccgacttcatcgcgaagcgcctaacg
ttccagaacacatttgggacaagtgggccggcggttgccatgagggtcgccgaggacagg
gccgcattctacggttgcaggtttgtgtcattccaggacacgcttctagacgacacgggg
cgtcattactatcgaggctgctatatcgaaggtggcactgattttatattcggaaatgcc
agggctttgttcgataagtgccacctccactccacctcgctggtcggcggtgcgttcacg
gcacataagcggtcggcggagtctgaagacacgggatttagtttcgtcgggtgcaaactg
acgggcgtcgggaagagcacatccatcctcgggcggccatggggtccctactctcgggtc
gtgttcgctctcagctacatgtccagcacggtgaggccggagggctgggatggctggagt
gaagaccctgccaaacagaggacagcgttctacgggcagtaccagtgctacggagaaggg
tcctggacggaggggagagttgcgtggtctcgcgacctgtcacaggctgaagctgcaccg
ttaatcaccaaagtttgggttgacggacaagagtggcttcagtag
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