Panicum virgatum (switchgrass): 120709960
Help
Entry
120709960 CDS
T07260
Name
(RefSeq) probable isoprenylcysteine alpha-carbonyl methylesterase ICMEL2 isoform X1
KO
K15889
prenylcysteine alpha-carboxyl methylesterase [EC:3.1.1.-]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00900
Terpenoid backbone biosynthesis
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
120709960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BD-FAE
Abhydrolase_3
COesterase
Peptidase_S9
Hydrolase_4
Abhydrolase_6
Abhydrolase_2
DLH
Motif
Other DBs
NCBI-GeneID:
120709960
NCBI-ProteinID:
XP_039851516
LinkDB
All DBs
Position
5K:41352016..41365036
Genome browser
AA seq
403 aa
AA seq
DB search
MRASSVEEAGALLARSDSARRRSASPVRSASPMPGTLRRQSSSFREDVGRAASETYLVSR
LTFTLLQFLGIGYRWMSQLLALTIYAILLMPGFIQVGYYYFFSSQVRRSIVYGDQPRNRL
DLYIPEDNGRPCPVVAFVTGGAWIIGYKAWGALLGRRLAERGIIVACIDYRNFPQGTIGD
MVSDASQGISFVCNNIAGYGGDPNQIYLMGQSAGAHIAACALMEQAVKESGGHPVSWSVT
QIKAYFGLSGGYNIHSLVDHFHERGLYRSLFLSIMEGEESLSRYSPEIVAKTSSAETIGL
LPLIVLMHGTEDYSIPSSASQSFVDVLQQAGAQAKLLLYEGKTHTDIFLQDPLRGGRDPL
VEDVLSIIHADDAIALQKVALAPTPRRLVFEWQLKLARQISPF
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgcgggcctcctccgtcgaggaggcgggtgcgctgctggcgcggagcgactccgcccgc
cgccgctccgcgtcgcccgtacggtccgcgtcgccgatgcccgggacgctccggcgccag
tcctcgtcgttccgcgaggacgtcggccgcgccgcctccgagacgtacctcgtctcgcgc
ctcaccttcacgctcctccagttcctcgggataggttaccgatggatgtcacaacttctt
gcactcacaatctatgcaattttacttatgccaggattcatacaagttggatattactat
ttcttttcaagccaagttcgtagaagtatagtctatggagaccaacctagaaacaggttg
gatctatacatacccgaagacaatggtaggccctgcccagtagtggcctttgtaactggt
ggcgcatggattattggttacaaggcctggggtgctcttcttggacgacgattggcagag
agaggaataatagttgcttgcattgactacagaaattttccccaaggtacaataggtgac
atggttagtgatgcttctcaggggatttcttttgtgtgtaacaacatcgccggttatgga
ggagatcctaatcagatctacttgatgggtcagtcagcaggtgcacatattgcagcatgt
gcactcatggagcaagcagtaaaagaatctggggggcatcctgtttcttggagtgtaacc
caaataaaagcgtattttggtttatctggaggatacaacatccatagtttggttgaccat
ttccatgagcgtggtctttatcgctcattattcctcagcataatggaaggagaggaatca
ttgtcgcgttattcccctgaaattgttgccaagacgtcaagtgctgagactataggtctt
ctgccacttattgttcttatgcatgggactgaagattattcaataccatcatctgctagt
caaagttttgttgacgtcctccaacaagctggtgctcaagcaaagttactattgtacgaa
gggaagacacatacagatatctttttacaggaccctcttaggggcggaagggatccattg
gttgaagatgtattgtctattattcatgctgatgatgcaattgcactgcaaaaggttgct
ttagcaccaactccaaggcgcttggtttttgagtggcaattaaagttggcccgccaaatt
agcccattctag
DBGET
integrated database retrieval system
