KEGG   Panicum virgatum (switchgrass): 120709994
Entry
120709994         CDS       T07260                                 
Name
(RefSeq) transcription initiation factor TFIID subunit 7-like
  KO
K03132  transcription initiation factor TFIID subunit 7
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    120709994
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pvir03021]
    120709994
   03036 Chromosome and associated proteins [BR:pvir03036]
    120709994
Transcription machinery [BR:pvir03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     120709994
   Coactivators
    SAGA/TFTC/STAGA complex
     120709994
Chromosome and associated proteins [BR:pvir03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    TFTC complex
     120709994
SSDB
Motif
Pfam: TAFII55_N Emfourin
Other DBs
NCBI-GeneID: 120709994
NCBI-ProteinID: XP_039851559
LinkDB
Position
5K:41776667..41779804
AA seq 198 aa
MEEQFILRVPPSVAERIERLMNESAAASSSSSNPDDTSLDLSFSEDGRNGTFMIGNESFP
ASLLDLPAVVESYKTYDDSVLIKTADIGQMIMVREENDPAPEGVEYKHGLTPPMRDARRR
RFRREPDLNAKLVNQVEKHLINIMHGVSVNQNASVIGGEEGGDRKKPPVARAPKQPDVQE
PTANGEEPERSDSEESEN
NT seq 597 nt   +upstreamnt  +downstreamnt
atggaggagcagttcatcctccgcgtgccgccgtccgtggcggagcggatcgagcgcctc
atgaatgaatccgccgccgcgtcctcctcctcctccaaccctgacgacacctccctcgac
ctctccttctcagaggatggaagaaatggtacatttatgataggtaatgagagctttcct
gcatctctcttggatctacctgcggtggtggagtcgtacaagacatatgatgattctgta
ctaattaaaactgctgatattggtcagatgattatggtaagagaagaaaatgaccctgct
ccagagggagttgaatacaagcatggccttactcctccaatgagggatgcacgcagacgc
cgtttccgcagagaaccagatttgaatgcgaagctggttaaccaagttgagaagcatctc
atcaatattatgcatggagtatctgtcaaccagaatgccagtgtgatcggaggcgaggaa
ggtggtgatcgtaagaaacctccagtggctcgtgcacccaagcagcctgatgttcaagag
ccaactgcgaatggtgaggaacctgagaggagtgactcggaagagtctgagaactga

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